PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pcin1546110029100 Alkaloid GS high pass
Pcin1666330044100 Alkaloid GS low borderline
Pcin1674550045360 Alkaloid GS low borderline
Pcin1702760046080 Alkaloid GS low borderline
Pcin1770210065700 Alkaloid GS low borderline
Pcin1836790085550 Alkaloid GS low borderline
Pcin1846570089800 Alkaloid GS low borderline
Pcin1852500093720 Alkaloid GS low borderline
Pcin1880110107310 Alkaloid GS low borderline
Pcin1905170124220 Alkaloid GS medium pass
Pcin1912670130410 Alkaloid GS low borderline
Pcin1913500131600 Alkaloid GS low borderline
Pcin1913570131700 Alkaloid GS high pass
Pcin1930500146510 Alkaloid GS high pass
Pcin1933560149210 Alkaloid GS low borderline
Pcin1951650168260 Alkaloid GS low borderline
Pcin1960100178440 Alkaloid GS low borderline
Pcin1975360198300 Alkaloid GS high pass
Pcin1984040210460 Alkaloid GS high pass
Pcin1987600216010 Alkaloid GS low borderline
Pcin1991430222090 Alkaloid GS low borderline
Pcin1994170226680 Alkaloid GS low borderline
Pcin1998820234450 Alkaloid GS medium pass
Pcin1999420235520 Alkaloid GS low borderline
Pcin2020950276020 Alkaloid GS low borderline
Pcin2023980282550 Alkaloid GS low borderline
Pcin2028240290920 Alkaloid GS low borderline
Pcin2030390295370 Alkaloid GS low borderline
Pcin2032810299760 Alkaloid GS low borderline
Pcin2033830301270 Alkaloid GS low borderline
Pcin1519600026280 Alkaloid H6H low borderline
Pcin1728750052080 Alkaloid H6H medium pass
Pcin1730490052920 Alkaloid H6H low borderline
Pcin1767860064250 Alkaloid H6H medium pass
Pcin1772470067060 Alkaloid H6H low borderline
Pcin1774300068000 Alkaloid H6H medium borderline
Pcin1834150083320 Alkaloid H6H medium borderline
Pcin1900080122050 Alkaloid H6H low borderline
Pcin1919540136620 Alkaloid H6H medium borderline
Pcin1925340142640 Alkaloid H6H low borderline
Pcin1938370154100 Alkaloid H6H medium borderline
Pcin1953860170490 Alkaloid H6H low borderline
Pcin1956160172980 Alkaloid H6H medium borderline
Pcin1956160172990 Alkaloid H6H low borderline
Pcin1963200182600 Alkaloid H6H medium borderline
Pcin1991090221590 Alkaloid H6H medium borderline
Pcin2002620241600 Alkaloid H6H low borderline
Pcin2005300245950 Alkaloid H6H medium borderline
Pcin2007270249090 Alkaloid H6H medium pass
Pcin2007270249100 Alkaloid H6H medium pass