PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Pcin1943520159720 Phenylpropanoid CAD medium borderline
Pcin1951650168260 Phenylpropanoid CAD low borderline
Pcin1974600197230 Phenylpropanoid CAD medium borderline
Pcin1975360198300 Phenylpropanoid CAD medium pass
Pcin1984040210460 Phenylpropanoid CAD medium pass
Pcin1991430222090 Phenylpropanoid CAD low borderline
Pcin1993910226240 Phenylpropanoid CAD low borderline
Pcin2004660245130 Phenylpropanoid CAD medium borderline
Pcin2010670256060 Phenylpropanoid CAD medium borderline
Pcin2016700267410 Phenylpropanoid CAD low borderline
Pcin1071210001670 Phenylpropanoid CCR medium borderline
Pcin1648810040770 Phenylpropanoid CCR low borderline
Pcin1662130043310 Phenylpropanoid CCR medium borderline
Pcin1724450050290 Phenylpropanoid CCR medium borderline
Pcin1909400127240 Phenylpropanoid CCR medium pass
Pcin1914190132320 Phenylpropanoid CCR medium borderline
Pcin1932790148360 Phenylpropanoid CCR low borderline
Pcin1961980180780 Phenylpropanoid CCR low borderline
Pcin2026110286650 Phenylpropanoid CCR low borderline
Pcin1769690065350 Phenylpropanoid CCoAOMT medium pass
Pcin1993830226130 Phenylpropanoid CCoAOMT medium pass
Pcin1526350027610 Phenylpropanoid COMT medium pass
Pcin1599490034190 Phenylpropanoid COMT low borderline
Pcin1770180065640 Phenylpropanoid COMT medium pass
Pcin1992770224410 Phenylpropanoid COMT medium pass
Pcin2006420247700 Phenylpropanoid COMT medium pass
Pcin2027540289510 Phenylpropanoid COMT medium pass
Pcin2029830294260 Phenylpropanoid COMT medium pass
Pcin2029890294430 Phenylpropanoid COMT medium pass
Pcin1886270111760 Phenylpropanoid CSE medium pass
Pcin1908210126170 Phenylpropanoid CSE low borderline
Pcin1935070150710 Phenylpropanoid CSE medium pass
Pcin1955930172640 Phenylpropanoid CSE medium pass
Pcin1986000213390 Phenylpropanoid CSE medium pass
Pcin2000710238030 Phenylpropanoid CSE medium pass
Pcin2011940258630 Phenylpropanoid CSE low borderline
Pcin2016670267300 Phenylpropanoid CSE medium pass
Pcin2029290292920 Phenylpropanoid CSE low borderline
Pcin1232080009860 Phenylpropanoid F5H/CYP84A medium pass
Pcin1551580030580 Phenylpropanoid F5H/CYP84A low borderline
Pcin1702150045870 Phenylpropanoid F5H/CYP84A medium borderline
Pcin1797350072900 Phenylpropanoid F5H/CYP84A medium borderline
Pcin1250020012660 Phenylpropanoid HCT low borderline
Pcin1886800112260 Phenylpropanoid HCT low borderline
Pcin1894210118260 Phenylpropanoid HCT low borderline
Pcin1914260132470 Phenylpropanoid HCT medium pass
Pcin1944290160440 Phenylpropanoid HCT medium pass
Pcin1945720161590 Phenylpropanoid HCT medium pass
Pcin1954170170740 Phenylpropanoid HCT medium pass
Pcin1957300174710 Phenylpropanoid HCT medium pass