PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

658
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pcin2028260291020 Alkaloid H6H medium pass
Pcin2033830301220 Alkaloid H6H medium borderline
Pcin1060250000510 Alkaloid IO medium borderline
Pcin1064120000840 Alkaloid IO medium borderline
Pcin1155460004650 Alkaloid IO medium borderline
Pcin1523850027280 Alkaloid IO medium borderline
Pcin1627690037520 Alkaloid IO medium borderline
Pcin1648800040740 Alkaloid IO medium borderline
Pcin1732220053770 Alkaloid IO medium borderline
Pcin1772040066890 Alkaloid IO medium borderline
Pcin1831830082110 Alkaloid IO low borderline
Pcin1832120082410 Alkaloid IO medium borderline
Pcin1869180100070 Alkaloid IO medium borderline
Pcin1878280106180 Alkaloid IO medium borderline
Pcin1891940117090 Alkaloid IO low borderline
Pcin1932160147890 Alkaloid IO medium borderline
Pcin1948150164390 Alkaloid IO low borderline
Pcin1956690173740 Alkaloid IO medium borderline
Pcin1976250199110 Alkaloid IO medium borderline
Pcin1982290207030 Alkaloid IO medium borderline
Pcin2005350246010 Alkaloid IO medium borderline
Pcin2009990254600 Alkaloid IO medium borderline
Pcin2012830260510 Alkaloid IO medium borderline
Pcin2014160263400 Alkaloid IO medium borderline
Pcin2014310263650 Alkaloid IO medium borderline
Pcin2018860271710 Alkaloid IO medium borderline
Pcin2027760289950 Alkaloid IO medium borderline
Pcin1917350134490 Alkaloid ISY medium pass
Pcin2005590246400 Alkaloid ISY medium pass
Pcin1216730006630 Alkaloid LAMT medium borderline
Pcin1779880070180 Alkaloid LAMT medium borderline
Pcin2003990243860 Alkaloid LAMT medium pass
Pcin2024270283270 Alkaloid LAMT medium pass
Pcin2028040290510 Alkaloid LAMT medium borderline
Pcin2028430291220 Alkaloid LAMT medium borderline
Pcin1595300033580 Alkaloid MPO low borderline
Pcin1634780038890 Alkaloid MPO low borderline
Pcin1763760061540 Alkaloid MPO medium pass
Pcin1797140072560 Alkaloid MPO high pass
Pcin2008270251340 Alkaloid MPO high pass
Pcin2021660277110 Alkaloid MPO medium pass
Pcin2030990296390 Alkaloid MPO medium pass
Pcin2032810299740 Alkaloid MPO low borderline
Pcin1602310035020 Alkaloid NCS low borderline
Pcin1807760077630 Alkaloid NCS low borderline
Pcin1846310089530 Alkaloid NCS low borderline
Pcin1896800119750 Alkaloid NCS low borderline
Pcin1896800119770 Alkaloid NCS low borderline
Pcin1913330131400 Alkaloid NCS low borderline
Pcin1920010136940 Alkaloid NCS low borderline