PlantSME Plant secondary metabolism enzyme database

Pseudobryum cinclidioides (pseudobryum_cinclidioides)

Imported from atlas release summary for Pseudobryum cinclidioides.

917
Candidate Protein Records
658
Pathway-Level Records
1753
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 182 21 BAHD (70) View species results
Phenylpropanoid pathway 149 12 POD (82) View species results
Alkaloid pathway 135 17 7DLGT (24) View species results
Flavonoid pathway 93 10 UFGT (39) View species results
Rosmarinic acid pathway 62 7 C4H (30) View species results
Steroid pathway 37 12 CAS (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 690 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Pcin2011830258410 Alkaloid STR low borderline
Pcin2013300261420 Alkaloid STR medium pass
Pcin2022380278640 Alkaloid STR low borderline
Pcin2022400278690 Alkaloid STR low borderline
Pcin2024940284670 Alkaloid STR medium pass
Pcin2028430291210 Alkaloid STR low borderline
Pcin2037680303420 Alkaloid STR low borderline
Pcin1322080016370 Alkaloid T16H medium pass
Pcin141220017180 Alkaloid T16H low borderline
Pcin1422580017350 Alkaloid T16H medium borderline
Pcin1702150045870 Alkaloid T16H medium borderline
Pcin1794700072200 Alkaloid T16H low borderline
Pcin1836550085420 Alkaloid T16H medium borderline
Pcin1879520107120 Alkaloid T16H medium borderline
Pcin1882150108260 Alkaloid T16H medium borderline
Pcin1900620122400 Alkaloid T16H medium borderline
Pcin1941350157120 Alkaloid T16H medium borderline
Pcin1944940160760 Alkaloid T16H low borderline
Pcin1947810164060 Alkaloid T16H medium borderline
Pcin1971240192890 Alkaloid T16H medium borderline
Pcin1971600193270 Alkaloid T16H low borderline
Pcin1982970208410 Alkaloid T16H medium borderline
Pcin2005950246870 Alkaloid T16H medium borderline
Pcin2012880260560 Alkaloid T16H medium borderline
Pcin2024630283950 Alkaloid T16H medium borderline
Pcin2033360300420 Alkaloid T16H medium borderline
Pcin1177840005170 Alkaloid T3O low borderline
Pcin1254070013170 Alkaloid T3O low borderline
Pcin1261380013580 Alkaloid T3O low borderline
Pcin1282350014600 Alkaloid T3O medium pass
Pcin1516040023660 Alkaloid T3O medium borderline
Pcin1548670029790 Alkaloid T3O medium borderline
Pcin1606010036650 Alkaloid T3O medium borderline
Pcin1737380055450 Alkaloid T3O medium borderline
Pcin1764440061950 Alkaloid T3O medium borderline
Pcin1774160067890 Alkaloid T3O medium borderline
Pcin1834170083340 Alkaloid T3O medium borderline
Pcin1840270086870 Alkaloid T3O medium pass
Pcin1847120090530 Alkaloid T3O low borderline
Pcin1868600099770 Alkaloid T3O medium borderline
Pcin1885070110610 Alkaloid T3O medium borderline
Pcin1886550111990 Alkaloid T3O medium pass
Pcin1896680119550 Alkaloid T3O medium borderline
Pcin1898420120740 Alkaloid T3O medium borderline
Pcin1901380122800 Alkaloid T3O low borderline
Pcin1909200127170 Alkaloid T3O medium pass
Pcin1941350157080 Alkaloid T3O medium borderline
Pcin1941350157110 Alkaloid T3O medium borderline
Pcin1941910157860 Alkaloid T3O medium pass
Pcin1944660160650 Alkaloid T3O medium borderline