PlantSME Plant secondary metabolism enzyme database

Psidium guajava (psidium_guajava)

Imported from atlas release summary for Psidium guajava.

1384
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.53% Alkaloid pathway 23.48% Phenylpropanoid pathway 21.68% Flavonoid pathway 12.5% Rosmarinic acid pathway 8.16% Steroid pathway 6.65%
Family Distribution
C3'H/CYP98A 5.79% C4H 5.55% BAHD 5.4% UGT 4.28% IFS 3.87% T3O 3.72% 7DLGT 3.66% POD 3.57%
Other Families 64.15%
More Families (96)
CYP76 120 3.54% 4CL 117 3.46% UFGT 114 3.37% F3H 97 2.86% NMT 81 2.39% DWF4/CYP90B1 79 2.33% STR 67 1.98% CAD 60 1.77% CODM/T6ODM 59 1.74% F3'H/CYP75B 58 1.71% LAC 57 1.68% H6H 56 1.65% SMT1/SMT2/SMT3 50 1.48% BR6OX2/CYP85A2 45 1.33% COMT 44 1.3% GS 43 1.27% CAS 43 1.27% TPS 38 1.12% TRI/TRII 36 1.06% CYP90D1 36 1.06% CYP71 36 1.06% GES 35 1.03% CSE 29 0.86% SGD 28 0.83% IFR 28 0.83% PYKS 27 0.8% CPD/CYP90A1 27 0.8% IO 26 0.77% HCT 26 0.77% F3'5'H/CYP75A 25 0.74% SLS 24 0.71% COR 24 0.71% PAL 24 0.71% TAT 24 0.71% 16OMT 23 0.68% T16H 22 0.65% RAS 22 0.65% 7DLH 21 0.62% ANR 21 0.62% PMT 20 0.59% CCR 19 0.56% FNS 18 0.53% CYP51G1 18 0.53% BBE 17 0.5% F5H/CYP84A 17 0.5% G8O/G8H 16 0.47% 8HGO 15 0.44% ROT3/CYP90C1 15 0.44% CHS 14 0.41% LAMT 13 0.38% NCS 13 0.38% BR6OX1/CYP85A1 13 0.38% CCoAOMT 11 0.32% SQS/FDFT1 10 0.3% CNMT 9 0.27% AACT 8 0.24% CYP719 7 0.21% MPO 7 0.21% ANS/LDOX 7 0.21% CPR 7 0.21% SQE 7 0.21% DFR 6 0.18% HPPR 6 0.18% HMGR 6 0.18% DXS 6 0.18% TYDC_DDC 5 0.15% CHI 5 0.15% IDI 5 0.15% 6OMT_4OMT_SOMT 4 0.12% DET2 4 0.12% GGPPS 4 0.12% MVK 4 0.12% CYP80B1 3 0.09% XMT_MXMT_DXMT 3 0.09% DWF1 3 0.09% SMO1/SMO2 3 0.09% FPPS 3 0.09% MVD 3 0.09% ISY 2 0.06% TDC 2 0.06% FLS 2 0.06% HDS/IspG 2 0.06% HMGS 2 0.06% PMK 2 0.06% MCT/IspD 2 0.06% HDR/IspH 2 0.06% ADC 1 0.03% CYP80F1 1 0.03% FK 1 0.03% CPI1 1 0.03% DWF7 1 0.03% HYD1 1 0.03% DWF5 1 0.03% DXR 1 0.03% MDS/IspF 1 0.03% CMK/IspE 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 381 19 BAHD (132) View species results
Alkaloid pathway 325 22 7DLGT (61) View species results
Phenylpropanoid pathway 300 11 POD (110) View species results
Flavonoid pathway 173 9 UFGT (104) View species results
Rosmarinic acid pathway 113 7 C4H (46) View species results
Steroid pathway 92 12 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1250 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status Best Target
psidium_guajava_evm.model.ctg27.51 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
psidium_guajava_evm.model.ctg27.52 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00001__sp_A0AA51Z3J4_TYDC2_LOPWI
psidium_guajava_evm.model.ctg27.65 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
psidium_guajava_evm.model.ctg3.614 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
psidium_guajava_evm.model.ctg37.46 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO