Pterocarya stenoptera (pterocarya_stenoptera)
Imported from atlas release summary for Pterocarya stenoptera.
2910
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2910
Candidate Genes
C4H
6.35%
C3'H/CYP98A
6.04%
BAHD
5.23%
IFS
4.3%
UGT
4.13%
CYP76
3.97%
POD
3.93%
7DLGT
3.61%
Other Families
62.45%
More Families (96)
T3O
246
3.38%
UFGT
237
3.25%
F3H
225
3.09%
4CL
222
3.05%
DWF4/CYP90B1
177
2.43%
BR6OX2/CYP85A2
146
2.0%
CAD
144
1.98%
F3'H/CYP75B
143
1.96%
H6H
130
1.78%
CODM/T6ODM
113
1.55%
NMT
106
1.45%
SMT1/SMT2/SMT3
103
1.41%
TRI/TRII
98
1.35%
LAC
98
1.35%
CYP71
96
1.32%
CAS
88
1.21%
T16H
82
1.13%
TPS
82
1.13%
CSE
81
1.11%
CYP90D1
79
1.08%
GES
78
1.07%
HCT
78
1.07%
STR
77
1.06%
GS
76
1.04%
G8O/G8H
70
0.96%
COMT
70
0.96%
PYKS
63
0.86%
7DLH
62
0.85%
TAT
61
0.84%
IFR
60
0.82%
NCS
52
0.71%
PMT
51
0.7%
FNS
48
0.66%
16OMT
45
0.62%
LAMT
45
0.62%
F5H/CYP84A
45
0.62%
IO
44
0.6%
SGD
43
0.59%
RAS
41
0.56%
PAL
39
0.54%
8HGO
38
0.52%
ANR
34
0.47%
SLS
33
0.45%
DFR
33
0.45%
CCR
33
0.45%
F3'5'H/CYP75A
31
0.43%
COR
30
0.41%
ANS/LDOX
28
0.38%
BR6OX1/CYP85A1
28
0.38%
CPD/CYP90A1
27
0.37%
CNMT
21
0.29%
SQE
21
0.29%
CHS
20
0.27%
ROT3/CYP90C1
20
0.27%
CYP719
19
0.26%
CCoAOMT
19
0.26%
CPR
18
0.25%
GGPPS
18
0.25%
TYDC_DDC
16
0.22%
FPPS
15
0.21%
CYP51G1
14
0.19%
MPO
12
0.16%
SQS/FDFT1
12
0.16%
HPPR
11
0.15%
CYP80B1
10
0.14%
HMGR
10
0.14%
XMT_MXMT_DXMT
9
0.12%
DXS
9
0.12%
ISY
8
0.11%
DET2
8
0.11%
MVK
8
0.11%
AACT
7
0.1%
CHI
6
0.08%
SMO1/SMO2
6
0.08%
HMGS
6
0.08%
MVD
6
0.08%
TDC
5
0.07%
6OMT_4OMT_SOMT
5
0.07%
FLS
5
0.07%
ADC
4
0.05%
HDR/IspH
4
0.05%
PMK
4
0.05%
BBE
3
0.04%
DWF1
3
0.04%
DWF7
3
0.04%
MCT/IspD
3
0.04%
CMK/IspE
3
0.04%
MDS/IspF
3
0.04%
DXR
3
0.04%
IDI
3
0.04%
ODC
2
0.03%
CPI1
2
0.03%
HYD1
2
0.03%
FK
2
0.03%
DWF5
2
0.03%
HDS/IspG
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 827 | 18 | BAHD (300) | View species results |
| Phenylpropanoid pathway | 681 | 13 | POD (266) | View species results |
| Alkaloid pathway | 587 | 26 | TRI/TRII (82) | View species results |
| Flavonoid pathway | 365 | 11 | UFGT (223) | View species results |
| Rosmarinic acid pathway | 266 | 7 | C4H (107) | View species results |
| Steroid pathway | 184 | 12 | SMT1/SMT2/SMT3 (75) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2877 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 500 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pstescaffold47790245880.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold47790245900.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold47790245910.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold49120251330.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold55890276140.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold55890276150.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold59670291080.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold59670291100.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold59670291110.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold63930308020.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold64720312300.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold64720312310.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold67440322960.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold69460332200.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold69480332210.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold69480332220.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold74440348140.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold83800378440.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold83870378560.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold83870378570.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold87590391870.1 | Alkaloid | T16H | low | borderline |
| Pstescaffold89760400230.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold89770400240.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold92720413180.1 | Alkaloid | T16H | low | borderline |
| Pstescaffold92730413190.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold92780413340.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold92780413350.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold92780413380.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold92790413400.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold93050414790.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold95480428120.1 | Alkaloid | T16H | medium | borderline |
| Pstescaffold95660429020.1 | Alkaloid | T16H | medium | pass |