Pugionium cornutum (pugionium_cornutum)
Imported from atlas release summary for Pugionium cornutum.
1616
Candidate Protein Records
1214
Pathway-Level Records
3074
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3074
Family-Level Calls
BAHD
6.7%
C3'H/CYP98A
5.89%
C4H
5.6%
POD
4.62%
4CL
4.0%
IFS
3.87%
CYP76
3.87%
T3O
3.32%
Other Families
62.13%
More Families (97)
NMT
91
2.96%
UGT
90
2.93%
UFGT
88
2.86%
F3H
87
2.83%
7DLGT
86
2.8%
DWF4/CYP90B1
74
2.41%
STR
64
2.08%
BR6OX2/CYP85A2
60
1.95%
CSE
54
1.76%
SMT1/SMT2/SMT3
51
1.66%
CODM/T6ODM
48
1.56%
F3'H/CYP75B
48
1.56%
IFR
48
1.56%
H6H
47
1.53%
CYP71
47
1.53%
SGD
43
1.4%
PYKS
37
1.2%
LAC
37
1.2%
CAD
36
1.17%
TAT
29
0.94%
TRI/TRII
27
0.88%
BBE
27
0.88%
T16H
25
0.81%
HCT
25
0.81%
PAL
24
0.78%
SLS
23
0.75%
LAMT
23
0.75%
RAS
23
0.75%
IO
21
0.68%
GS
20
0.65%
COMT
20
0.65%
BR6OX1/CYP85A1
20
0.65%
ANR
19
0.62%
F5H/CYP84A
19
0.62%
CCR
19
0.62%
CYP90D1
19
0.62%
CAS
19
0.62%
8HGO
16
0.52%
G8O/G8H
16
0.52%
16OMT
15
0.49%
FNS
14
0.46%
CPD/CYP90A1
14
0.46%
PMT
13
0.42%
GGPPS
13
0.42%
GES
12
0.39%
CNMT
12
0.39%
F3'5'H/CYP75A
12
0.39%
CYP51G1
12
0.39%
DWF1
12
0.39%
ANS/LDOX
11
0.36%
TPS
10
0.33%
CPR
9
0.29%
NCS
8
0.26%
COR
8
0.26%
DFR
8
0.26%
FPPS
8
0.26%
AACT
8
0.26%
DWF5
7
0.23%
SQS/FDFT1
7
0.23%
MVD
7
0.23%
CCoAOMT
6
0.2%
SMO1/SMO2
6
0.2%
ROT3/CYP90C1
6
0.2%
SQE
6
0.2%
IDI
6
0.2%
MPO
5
0.16%
ADC
5
0.16%
CHS
5
0.16%
DET2
5
0.16%
DWF7
5
0.16%
MCT/IspD
5
0.16%
MVK
5
0.16%
CYP80F1
4
0.13%
7DLH
4
0.13%
ISY
4
0.13%
DXS
4
0.13%
CYP719
3
0.1%
TDC
3
0.1%
XMT_MXMT_DXMT
3
0.1%
CYP80B1
3
0.1%
CHI
3
0.1%
CMK/IspE
3
0.1%
FLS
2
0.07%
HPPR
2
0.07%
PMK
2
0.07%
HMGR
2
0.07%
HMGS
2
0.07%
HDR/IspH
2
0.07%
6OMT_4OMT_SOMT
1
0.03%
TYDC_DDC
1
0.03%
ODC
1
0.03%
HYD1
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
MDS/IspF
1
0.03%
HDS/IspG
1
0.03%
DXR
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 360 | 19 | BAHD (161) | View species results |
| Phenylpropanoid pathway | 288 | 11 | POD (125) | View species results |
| Alkaloid pathway | 251 | 18 | NMT (50) | View species results |
| Flavonoid pathway | 130 | 8 | UFGT (82) | View species results |
| Rosmarinic acid pathway | 111 | 7 | C4H (43) | View species results |
| Steroid pathway | 74 | 11 | SMT1/SMT2/SMT3 (27) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1123 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 254 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| pugionium_cornutum_Pco08367.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco08368.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco08660.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco09220.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco09245.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco09491.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco09587.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco10065.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco11047.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco11281.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco13791.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco13891.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco14311.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco16798.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco18607.t1 | Alkaloid | TRI/TRII | medium | pass |
| pugionium_cornutum_Pco19933.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco28347.t1 | Alkaloid | TRI/TRII | low | borderline |
| pugionium_cornutum_Pco15545.t1 | Alkaloid | TYDC_DDC | medium | borderline |
| pugionium_cornutum_Pco10817.t1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| pugionium_cornutum_Pco11271.t1 | Alkaloid | XMT_MXMT_DXMT | low | borderline |
| pugionium_cornutum_Pco29404.t1 | Alkaloid | XMT_MXMT_DXMT | medium | borderline |
| pugionium_cornutum_Pco00942.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco00944.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco00945.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco00950.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco01339.t1 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco01894.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco02024.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco03085.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco03086.t2 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco03601.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco04627.t1 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco06136.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco07984.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco07985.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco08199.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco08282.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco08610.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco08727.t1 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco11259.t1 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco12704.t2 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco13937.t1 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco14564.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco15376.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco16421.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco16447.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco17405.t1 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco17406.t1 | Flavonoid | 4CL | medium | pass |
| pugionium_cornutum_Pco18265.t1 | Flavonoid | 4CL | low | borderline |
| pugionium_cornutum_Pco19160.t1 | Flavonoid | 4CL | medium | pass |