Regmatodon serrulatus (regmatodon_serrulatus)
Imported from atlas release summary for Regmatodon serrulatus.
882
Candidate Protein Records
620
Pathway-Level Records
1656
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1656
Family-Level Calls
C4H
6.94%
POD
5.62%
C3'H/CYP98A
5.56%
BAHD
5.43%
4CL
4.89%
CYP76
4.17%
NMT
3.74%
IFS
3.26%
Other Families
60.39%
More Families (95)
PAL
42
2.54%
F3H
40
2.42%
T3O
39
2.36%
DWF4/CYP90B1
38
2.29%
IFR
37
2.23%
STR
35
2.11%
F3'H/CYP75B
34
2.05%
BR6OX2/CYP85A2
34
2.05%
UGT
34
2.05%
GS
33
1.99%
UFGT
31
1.87%
7DLGT
30
1.81%
CODM/T6ODM
29
1.75%
PYKS
25
1.51%
G8O/G8H
24
1.45%
SMT1/SMT2/SMT3
20
1.21%
COMT
19
1.15%
CAD
18
1.09%
CYP71
18
1.09%
TRI/TRII
17
1.03%
F3'5'H/CYP75A
17
1.03%
H6H
16
0.97%
SLS
15
0.91%
CHS
14
0.85%
IO
13
0.79%
T16H
13
0.79%
CAS
13
0.79%
CYP90D1
12
0.72%
7DLH
11
0.66%
16OMT
11
0.66%
FNS
11
0.66%
CSE
11
0.66%
CPD/CYP90A1
11
0.66%
NCS
10
0.6%
RAS
10
0.6%
HCT
9
0.54%
LAC
9
0.54%
CNMT
8
0.48%
8HGO
8
0.48%
SGD
8
0.48%
TDC
7
0.42%
PMT
7
0.42%
LAMT
7
0.42%
COR
7
0.42%
SQS/FDFT1
7
0.42%
BBE
6
0.36%
CCR
6
0.36%
F5H/CYP84A
6
0.36%
AACT
6
0.36%
MPO
5
0.3%
DFR
5
0.3%
ANR
5
0.3%
CPR
5
0.3%
GGPPS
5
0.3%
CYP719
4
0.24%
CYP80B1
4
0.24%
CHI
4
0.24%
TAT
4
0.24%
ROT3/CYP90C1
4
0.24%
BR6OX1/CYP85A1
4
0.24%
DWF5
4
0.24%
MVD
4
0.24%
FLS
3
0.18%
ANS/LDOX
3
0.18%
DET2
3
0.18%
SQE
3
0.18%
HDS/IspG
3
0.18%
MVK
3
0.18%
ADC
2
0.12%
TYDC_DDC
2
0.12%
GES
2
0.12%
6OMT_4OMT_SOMT
2
0.12%
CCoAOMT
2
0.12%
HPPR
2
0.12%
CYP51G1
2
0.12%
SMO1/SMO2
2
0.12%
MCT/IspD
2
0.12%
FPPS
2
0.12%
HDR/IspH
2
0.12%
TPS
2
0.12%
XMT_MXMT_DXMT
1
0.06%
ISY
1
0.06%
HYD1
1
0.06%
DWF7
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF1
1
0.06%
MDS/IspF
1
0.06%
GPPS
1
0.06%
DXS
1
0.06%
IDI
1
0.06%
DXR
1
0.06%
HMGS
1
0.06%
HMGR
1
0.06%
CMK/IspE
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 166 | 11 | POD (87) | View species results |
| Terpenoid pathway | 147 | 18 | BAHD (57) | View species results |
| Alkaloid pathway | 126 | 20 | NMT (25) | View species results |
| Flavonoid pathway | 87 | 14 | UFGT (28) | View species results |
| Rosmarinic acid pathway | 60 | 6 | C4H (21) | View species results |
| Steroid pathway | 34 | 12 | CAS (12) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 633 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 109 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Rser1585450213400 | Rosmarinic Acid | C4H | low | borderline |
| Rser1585460213650 | Rosmarinic Acid | C4H | low | borderline |
| Rser1585460213660 | Rosmarinic Acid | C4H | low | borderline |
| Rser1585460213670 | Rosmarinic Acid | C4H | medium | pass |
| Rser1585460213680 | Rosmarinic Acid | C4H | low | borderline |
| Rser1585460213690 | Rosmarinic Acid | C4H | medium | pass |
| Rser1585510214530 | Rosmarinic Acid | C4H | low | borderline |
| Rser1585580216370 | Rosmarinic Acid | C4H | low | borderline |
| Rser1585580216890 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586000228440 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586060230230 | Rosmarinic Acid | C4H | medium | pass |
| Rser1586340236900 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586350237190 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586350237200 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586460240710 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586520242640 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586520242650 | Rosmarinic Acid | C4H | low | borderline |
| Rser1586520242670 | Rosmarinic Acid | C4H | low | borderline |
| Rser1587000248740 | Rosmarinic Acid | C4H | medium | pass |
| Rser1587310252480 | Rosmarinic Acid | C4H | low | borderline |
| Rser1598540254700 | Rosmarinic Acid | C4H | low | borderline |
| Rser1615690255090 | Rosmarinic Acid | C4H | low | borderline |
| Rser1556360029460 | Rosmarinic Acid | CPR | medium | pass |
| Rser1572300055380 | Rosmarinic Acid | CPR | low | borderline |
| Rser1576660075590 | Rosmarinic Acid | CPR | medium | pass |
| Rser1582770149420 | Rosmarinic Acid | CPR | medium | pass |
| Rser1584660192780 | Rosmarinic Acid | CPR | medium | pass |
| Rser1562150035680 | Rosmarinic Acid | HPPR | low | borderline |
| Rser1586990248720 | Rosmarinic Acid | HPPR | low | borderline |
| Rser1450470004080 | Rosmarinic Acid | PAL | high | pass |
| Rser1461600005580 | Rosmarinic Acid | PAL | high | pass |
| Rser1461600005600 | Rosmarinic Acid | PAL | medium | pass |
| Rser1551170024200 | Rosmarinic Acid | PAL | high | pass |
| Rser1566720043060 | Rosmarinic Acid | PAL | high | pass |
| Rser1577360079530 | Rosmarinic Acid | PAL | medium | pass |
| Rser1578330086970 | Rosmarinic Acid | PAL | high | pass |
| Rser1580100105560 | Rosmarinic Acid | PAL | high | pass |
| Rser1580730114270 | Rosmarinic Acid | PAL | high | pass |
| Rser1585900225240 | Rosmarinic Acid | PAL | high | pass |
| Rser1585980227710 | Rosmarinic Acid | PAL | high | pass |
| Rser1586560243350 | Rosmarinic Acid | PAL | high | pass |
| Rser1589730254580 | Rosmarinic Acid | PAL | high | pass |
| Rser243420256950 | Rosmarinic Acid | PAL | high | pass |
| Rser1547250020730 | Rosmarinic Acid | RAS | medium | pass |
| Rser1571290052560 | Rosmarinic Acid | RAS | low | borderline |
| Rser1578230086080 | Rosmarinic Acid | RAS | medium | pass |
| Rser1581370121860 | Rosmarinic Acid | RAS | low | borderline |
| Rser1582120132710 | Rosmarinic Acid | RAS | low | borderline |
| Rser1582590144090 | Rosmarinic Acid | RAS | medium | pass |
| Rser1582660146650 | Rosmarinic Acid | RAS | low | borderline |