Rhoiptelea chiliantha (rhoiptelea_chiliantha)
Imported from atlas release summary for Rhoiptelea chiliantha.
1297
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1297
Candidate Genes
BAHD
6.61%
4CL
5.99%
POD
5.34%
C4H
5.27%
C3'H/CYP98A
4.34%
UGT
3.92%
7DLGT
3.51%
UFGT
3.34%
Other Families
61.69%
More Families (96)
F3H
94
3.24%
NMT
92
3.17%
IFS
90
3.1%
CYP76
78
2.69%
T3O
64
2.2%
CODM/T6ODM
57
1.96%
STR
48
1.65%
LAC
48
1.65%
CAD
46
1.58%
DWF4/CYP90B1
46
1.58%
BR6OX2/CYP85A2
44
1.51%
SMT1/SMT2/SMT3
43
1.48%
IFR
42
1.45%
H6H
41
1.41%
TRI/TRII
38
1.31%
GS
35
1.2%
F3'H/CYP75B
34
1.17%
HCT
31
1.07%
PAL
30
1.03%
CAS
30
1.03%
CYP71
28
0.96%
FNS
25
0.86%
RAS
25
0.86%
TAT
25
0.86%
CYP90D1
25
0.86%
SLS
24
0.83%
CSE
23
0.79%
PMT
22
0.76%
7DLH
21
0.72%
COMT
21
0.72%
PYKS
20
0.69%
G8O/G8H
19
0.65%
CCR
19
0.65%
SGD
18
0.62%
BR6OX1/CYP85A1
18
0.62%
NCS
16
0.55%
IO
16
0.55%
T16H
15
0.52%
ANR
15
0.52%
F5H/CYP84A
15
0.52%
8HGO
14
0.48%
COR
14
0.48%
TPS
14
0.48%
16OMT
13
0.45%
GES
13
0.45%
BBE
12
0.41%
GGPPS
12
0.41%
FPPS
12
0.41%
DFR
11
0.38%
CHS
11
0.38%
F3'5'H/CYP75A
11
0.38%
AACT
11
0.38%
CNMT
10
0.34%
CPR
9
0.31%
SQS/FDFT1
9
0.31%
ROT3/CYP90C1
9
0.31%
LAMT
8
0.28%
HPPR
8
0.28%
SQE
8
0.28%
CPD/CYP90A1
8
0.28%
DXS
8
0.28%
MPO
7
0.24%
ISY
7
0.24%
CYP80B1
7
0.24%
ANS/LDOX
7
0.24%
MVD
7
0.24%
MCT/IspD
6
0.21%
CYP719
5
0.17%
CHI
5
0.17%
DET2
5
0.17%
CYP51G1
5
0.17%
SMO1/SMO2
5
0.17%
HDS/IspG
5
0.17%
MVK
5
0.17%
HMGR
5
0.17%
TDC
4
0.14%
HDR/IspH
4
0.14%
TYDC_DDC
3
0.1%
ODC
3
0.1%
HYD1
3
0.1%
PMK
3
0.1%
HMGS
3
0.1%
ADC
2
0.07%
DWF5
2
0.07%
DWF7
2
0.07%
DWF1
2
0.07%
FK
2
0.07%
IDI
2
0.07%
DXR
2
0.07%
MDS/IspF
2
0.07%
6OMT_4OMT_SOMT
1
0.03%
XMT_MXMT_DXMT
1
0.03%
FLS
1
0.03%
CCoAOMT
1
0.03%
CPI1
1
0.03%
CMK/IspE
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 368 | 20 | BAHD (154) | View species results |
| Phenylpropanoid pathway | 306 | 11 | POD (142) | View species results |
| Alkaloid pathway | 259 | 22 | NMT (47) | View species results |
| Flavonoid pathway | 183 | 11 | UFGT (90) | View species results |
| Rosmarinic acid pathway | 108 | 7 | 4CL (37) | View species results |
| Steroid pathway | 73 | 11 | CAS (26) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 861 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 248 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| rhoiptelea_chiliantha.genome_RCH_Chr02G11570.1 | Terpenoid | TPS | medium | pass | TPS__00062__sp_B9T536_TPS10_RICCO |
| rhoiptelea_chiliantha.genome_RCH_Chr04G15200.1 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| rhoiptelea_chiliantha.genome_RCH_Chr06G07520.1 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| rhoiptelea_chiliantha.genome_RCH_Chr06G07530.1 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| rhoiptelea_chiliantha.genome_RCH_Chr06G15850.1 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| rhoiptelea_chiliantha.genome_RCH_Chr06G15860.1 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| rhoiptelea_chiliantha.genome_RCH_Chr07G12930.1 | Terpenoid | TPS | medium | pass | TPS__00110__sp_G0Y7D1_TPS1_LITCU |
| rhoiptelea_chiliantha.genome_RCH_Chr07G20620.1 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| rhoiptelea_chiliantha.genome_RCH_Chr08G05680.1 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| rhoiptelea_chiliantha.genome_RCH_Chr10G12460.1 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| rhoiptelea_chiliantha.genome_RCH_Chr12G05770.1 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| rhoiptelea_chiliantha.genome_RCH_Chr12G05780.1 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| rhoiptelea_chiliantha.genome_RCH_Chr12G05790.1 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| rhoiptelea_chiliantha.genome_RCH_Chr12G10390.1 | Terpenoid | TPS | medium | pass | TPS__00059__sp_B9RXW0_TPS7_RICCO |