Robinia pseudoacacia (robinia_pseudoacacia)
Imported from atlas release summary for Robinia pseudoacacia.
2141
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2141
Candidate Genes
C4H
6.16%
C3'H/CYP98A
5.85%
UGT
5.32%
BAHD
4.92%
7DLGT
4.59%
UFGT
4.42%
CYP76
4.1%
IFS
3.87%
Other Families
60.76%
More Families (97)
POD
192
3.66%
T3O
191
3.64%
4CL
171
3.26%
F3H
169
3.22%
NMT
121
2.31%
CODM/T6ODM
118
2.25%
DWF4/CYP90B1
114
2.17%
F3'H/CYP75B
102
1.94%
BR6OX2/CYP85A2
90
1.72%
COMT
86
1.64%
STR
85
1.62%
H6H
70
1.33%
TRI/TRII
69
1.32%
CAD
66
1.26%
16OMT
60
1.14%
HCT
60
1.14%
SMT1/SMT2/SMT3
58
1.11%
CYP71
57
1.09%
G8O/G8H
53
1.01%
IFR
53
1.01%
CAS
52
0.99%
LAC
51
0.97%
CYP90D1
49
0.93%
CSE
48
0.92%
RAS
45
0.86%
PYKS
42
0.8%
PMT
39
0.74%
SGD
39
0.74%
BBE
38
0.72%
GES
38
0.72%
TPS
37
0.71%
ANR
34
0.65%
T16H
31
0.59%
GS
31
0.59%
IO
25
0.48%
COR
25
0.48%
F3'5'H/CYP75A
25
0.48%
PAL
24
0.46%
CPD/CYP90A1
24
0.46%
SLS
23
0.44%
7DLH
22
0.42%
CCR
22
0.42%
TAT
22
0.42%
CYP51G1
22
0.42%
8HGO
21
0.4%
F5H/CYP84A
21
0.4%
FNS
20
0.38%
MPO
19
0.36%
BR6OX1/CYP85A1
19
0.36%
LAMT
17
0.32%
ANS/LDOX
17
0.32%
ROT3/CYP90C1
13
0.25%
NCS
12
0.23%
CHS
12
0.23%
DWF1
12
0.23%
CNMT
11
0.21%
TDC
11
0.21%
CCoAOMT
11
0.21%
SQS/FDFT1
11
0.21%
AACT
11
0.21%
TYDC_DDC
9
0.17%
DFR
9
0.17%
CPR
9
0.17%
GGPPS
9
0.17%
CHI
8
0.15%
HPPR
8
0.15%
SQE
8
0.15%
HMGS
8
0.15%
ISY
7
0.13%
DXS
7
0.13%
FPPS
6
0.11%
CYP80B1
5
0.1%
CYP719
5
0.1%
SMO1/SMO2
5
0.1%
ODC
4
0.08%
DET2
4
0.08%
HMGR
4
0.08%
MVK
4
0.08%
MVD
4
0.08%
CYP80F1
3
0.06%
6OMT_4OMT_SOMT
3
0.06%
FLS
3
0.06%
HYD1
3
0.06%
DWF7
3
0.06%
ADC
2
0.04%
MDS/IspF
2
0.04%
MCT/IspD
2
0.04%
DXR
2
0.04%
HDR/IspH
2
0.04%
XMT_MXMT_DXMT
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
CMK/IspE
1
0.02%
HDS/IspG
1
0.02%
IDI
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 621 | 19 | UGT (261) | View species results |
| Alkaloid pathway | 475 | 20 | 7DLGT (122) | View species results |
| Phenylpropanoid pathway | 446 | 11 | POD (177) | View species results |
| Flavonoid pathway | 317 | 10 | UFGT (216) | View species results |
| Rosmarinic acid pathway | 180 | 7 | C4H (79) | View species results |
| Steroid pathway | 102 | 11 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1942 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 363 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| robinia_pseudoacacia_CHAGGene27534 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27535 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27536 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27537 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27538 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27541 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27544 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27545 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27547 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene27727 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| robinia_pseudoacacia_CHAGGene31170 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| robinia_pseudoacacia_CHAGGene31172 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene31175 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| robinia_pseudoacacia_CHAGGene31177 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| robinia_pseudoacacia_CHAGGene31178 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| robinia_pseudoacacia_CHAGGene31179 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| robinia_pseudoacacia_CHAGGene31180 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| robinia_pseudoacacia_CHAGGene31183 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| robinia_pseudoacacia_CHAGGene31237 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |