Robinia pseudoacacia (robinia_pseudoacacia)
Imported from atlas release summary for Robinia pseudoacacia.
2466
Candidate Protein Records
2141
Pathway-Level Records
5245
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5245
Family-Level Calls
C4H
6.16%
C3'H/CYP98A
5.85%
UGT
5.32%
BAHD
4.92%
7DLGT
4.59%
UFGT
4.42%
CYP76
4.1%
IFS
3.87%
Other Families
60.76%
More Families (97)
POD
192
3.66%
T3O
191
3.64%
4CL
171
3.26%
F3H
169
3.22%
NMT
121
2.31%
CODM/T6ODM
118
2.25%
DWF4/CYP90B1
114
2.17%
F3'H/CYP75B
102
1.94%
BR6OX2/CYP85A2
90
1.72%
COMT
86
1.64%
STR
85
1.62%
H6H
70
1.33%
TRI/TRII
69
1.32%
CAD
66
1.26%
16OMT
60
1.14%
HCT
60
1.14%
SMT1/SMT2/SMT3
58
1.11%
CYP71
57
1.09%
G8O/G8H
53
1.01%
IFR
53
1.01%
CAS
52
0.99%
LAC
51
0.97%
CYP90D1
49
0.93%
CSE
48
0.92%
RAS
45
0.86%
PYKS
42
0.8%
PMT
39
0.74%
SGD
39
0.74%
BBE
38
0.72%
GES
38
0.72%
TPS
37
0.71%
ANR
34
0.65%
T16H
31
0.59%
GS
31
0.59%
IO
25
0.48%
COR
25
0.48%
F3'5'H/CYP75A
25
0.48%
PAL
24
0.46%
CPD/CYP90A1
24
0.46%
SLS
23
0.44%
7DLH
22
0.42%
CCR
22
0.42%
TAT
22
0.42%
CYP51G1
22
0.42%
8HGO
21
0.4%
F5H/CYP84A
21
0.4%
FNS
20
0.38%
MPO
19
0.36%
BR6OX1/CYP85A1
19
0.36%
LAMT
17
0.32%
ANS/LDOX
17
0.32%
ROT3/CYP90C1
13
0.25%
NCS
12
0.23%
CHS
12
0.23%
DWF1
12
0.23%
CNMT
11
0.21%
TDC
11
0.21%
CCoAOMT
11
0.21%
SQS/FDFT1
11
0.21%
AACT
11
0.21%
TYDC_DDC
9
0.17%
DFR
9
0.17%
CPR
9
0.17%
GGPPS
9
0.17%
CHI
8
0.15%
HPPR
8
0.15%
SQE
8
0.15%
HMGS
8
0.15%
ISY
7
0.13%
DXS
7
0.13%
FPPS
6
0.11%
CYP80B1
5
0.1%
CYP719
5
0.1%
SMO1/SMO2
5
0.1%
ODC
4
0.08%
DET2
4
0.08%
HMGR
4
0.08%
MVK
4
0.08%
MVD
4
0.08%
CYP80F1
3
0.06%
6OMT_4OMT_SOMT
3
0.06%
FLS
3
0.06%
HYD1
3
0.06%
DWF7
3
0.06%
ADC
2
0.04%
MDS/IspF
2
0.04%
MCT/IspD
2
0.04%
DXR
2
0.04%
HDR/IspH
2
0.04%
XMT_MXMT_DXMT
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
CMK/IspE
1
0.02%
HDS/IspG
1
0.02%
IDI
1
0.02%
PMK
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 621 | 19 | UGT (261) | View species results |
| Alkaloid pathway | 475 | 20 | 7DLGT (122) | View species results |
| Phenylpropanoid pathway | 446 | 11 | POD (177) | View species results |
| Flavonoid pathway | 317 | 10 | UFGT (216) | View species results |
| Rosmarinic acid pathway | 180 | 7 | C4H (79) | View species results |
| Steroid pathway | 102 | 11 | CAS (36) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1942 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 363 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| robinia_pseudoacacia_CHAGGene11736 | Terpenoid | HDR/IspH | high | pass |
| robinia_pseudoacacia_CHAGGene20202 | Terpenoid | HDR/IspH | low | borderline |
| robinia_pseudoacacia_CHAGGene22208 | Terpenoid | HDS/IspG | high | pass |
| robinia_pseudoacacia_CHAGGene01406 | Terpenoid | HMGR | medium | pass |
| robinia_pseudoacacia_CHAGGene05355 | Terpenoid | HMGR | medium | pass |
| robinia_pseudoacacia_CHAGGene10527 | Terpenoid | HMGR | medium | pass |
| robinia_pseudoacacia_CHAGGene28665 | Terpenoid | HMGR | medium | pass |
| robinia_pseudoacacia_CHAGGene02058 | Terpenoid | HMGS | high | pass |
| robinia_pseudoacacia_CHAGGene06308 | Terpenoid | HMGS | high | pass |
| robinia_pseudoacacia_CHAGGene12911 | Terpenoid | HMGS | medium | pass |
| robinia_pseudoacacia_CHAGGene13351 | Terpenoid | HMGS | high | pass |
| robinia_pseudoacacia_CHAGGene14338 | Terpenoid | HMGS | low | borderline |
| robinia_pseudoacacia_CHAGGene15061 | Terpenoid | HMGS | low | borderline |
| robinia_pseudoacacia_CHAGGene16835 | Terpenoid | HMGS | high | pass |
| robinia_pseudoacacia_CHAGGene26228 | Terpenoid | HMGS | low | borderline |
| robinia_pseudoacacia_CHAGGene24857 | Terpenoid | IDI | medium | pass |
| robinia_pseudoacacia_CHAGGene03870 | Terpenoid | MCT/IspD | low | borderline |
| robinia_pseudoacacia_CHAGGene06681 | Terpenoid | MCT/IspD | high | pass |
| robinia_pseudoacacia_CHAGGene02128 | Terpenoid | MDS/IspF | high | pass |
| robinia_pseudoacacia_CHAGGene18601 | Terpenoid | MDS/IspF | low | borderline |
| robinia_pseudoacacia_CHAGGene16015 | Terpenoid | MVD | low | borderline |
| robinia_pseudoacacia_CHAGGene21324 | Terpenoid | MVD | low | borderline |
| robinia_pseudoacacia_CHAGGene21329 | Terpenoid | MVD | medium | pass |
| robinia_pseudoacacia_CHAGGene21645 | Terpenoid | MVD | low | borderline |
| robinia_pseudoacacia_CHAGGene07076 | Terpenoid | MVK | low | borderline |
| robinia_pseudoacacia_CHAGGene08804 | Terpenoid | MVK | low | borderline |
| robinia_pseudoacacia_CHAGGene27728 | Terpenoid | MVK | medium | pass |
| robinia_pseudoacacia_CHAGGene28095 | Terpenoid | MVK | low | borderline |
| robinia_pseudoacacia_CHAGGene32582 | Terpenoid | PMK | medium | pass |
| robinia_pseudoacacia_CHAGGene04220 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene04222 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene04223 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene04225 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene04304 | Terpenoid | TPS | low | borderline |
| robinia_pseudoacacia_CHAGGene05300 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene07844 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene07845 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene07846 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene07847 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene07848 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene07851 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene07941 | Terpenoid | TPS | low | borderline |
| robinia_pseudoacacia_CHAGGene07942 | Terpenoid | TPS | low | borderline |
| robinia_pseudoacacia_CHAGGene11336 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene11337 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene12365 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene12371 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene12735 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene16935 | Terpenoid | TPS | medium | pass |
| robinia_pseudoacacia_CHAGGene21556 | Terpenoid | TPS | medium | pass |