Roridula gorgonias (roridula_gorgonias)
Imported from atlas release summary for Roridula gorgonias.
954
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
954
Candidate Genes
C4H
6.56%
BAHD
6.24%
C3'H/CYP98A
5.06%
4CL
4.74%
POD
3.89%
UGT
3.65%
F3H
3.6%
IFS
3.36%
Other Families
62.9%
More Families (96)
NMT
71
2.88%
CYP76
63
2.55%
STR
58
2.35%
7DLGT
56
2.27%
H6H
53
2.15%
T3O
51
2.07%
DWF4/CYP90B1
44
1.78%
CODM/T6ODM
43
1.74%
UFGT
42
1.7%
F3'H/CYP75B
41
1.66%
CAD
41
1.66%
TRI/TRII
37
1.5%
G8O/G8H
37
1.5%
LAC
36
1.46%
SMT1/SMT2/SMT3
36
1.46%
GS
30
1.22%
FNS
30
1.22%
CSE
30
1.22%
CAS
30
1.22%
IFR
29
1.17%
BR6OX2/CYP85A2
28
1.13%
7DLH
27
1.09%
CYP71
27
1.09%
TAT
25
1.01%
PYKS
24
0.97%
HCT
24
0.97%
SGD
23
0.93%
SLS
22
0.89%
T16H
22
0.89%
RAS
21
0.85%
CPD/CYP90A1
19
0.77%
PAL
18
0.73%
F3'5'H/CYP75A
18
0.73%
BBE
17
0.69%
COMT
17
0.69%
ANR
16
0.65%
PMT
15
0.61%
TPS
15
0.61%
GES
14
0.57%
ANS/LDOX
13
0.53%
F5H/CYP84A
13
0.53%
CYP90D1
13
0.53%
NCS
12
0.49%
IO
12
0.49%
DFR
12
0.49%
CCR
12
0.49%
BR6OX1/CYP85A1
12
0.49%
8HGO
11
0.45%
ROT3/CYP90C1
10
0.41%
AACT
9
0.36%
COR
8
0.32%
16OMT
8
0.32%
CNMT
8
0.32%
CHS
8
0.32%
CYP80B1
7
0.28%
CYP719
7
0.28%
HPPR
7
0.28%
CYP51G1
7
0.28%
SQS/FDFT1
7
0.28%
GGPPS
7
0.28%
ISY
6
0.24%
DET2
6
0.24%
MVK
6
0.24%
LAMT
5
0.2%
MPO
5
0.2%
CHI
5
0.2%
CPR
5
0.2%
DXS
5
0.2%
FPPS
5
0.2%
XMT_MXMT_DXMT
4
0.16%
SMO1/SMO2
4
0.16%
TDC
3
0.12%
CCoAOMT
3
0.12%
DWF7
3
0.12%
SQE
3
0.12%
PMK
3
0.12%
HMGR
3
0.12%
ODC
2
0.08%
TYDC_DDC
2
0.08%
DXR
2
0.08%
CMK/IspE
2
0.08%
MVD
2
0.08%
HMGS
2
0.08%
MCT/IspD
2
0.08%
6OMT_4OMT_SOMT
1
0.04%
ADC
1
0.04%
FLS
1
0.04%
CPI1
1
0.04%
DWF5
1
0.04%
FK
1
0.04%
HYD1
1
0.04%
DWF1
1
0.04%
MDS/IspF
1
0.04%
HDR/IspH
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 282 | 20 | BAHD (126) | View species results |
| Phenylpropanoid pathway | 218 | 13 | POD (83) | View species results |
| Alkaloid pathway | 216 | 22 | NMT (40) | View species results |
| Flavonoid pathway | 91 | 11 | UFGT (28) | View species results |
| Rosmarinic acid pathway | 78 | 7 | 4CL (27) | View species results |
| Steroid pathway | 69 | 14 | CAS (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 850 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 199 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Rgor795210142500.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Rgor795750145420.1 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Rgor796320147820.1 | Alkaloid | NMT | low | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Rgor798220156930.1 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Rgor801760174390.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Rgor803430181710.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Rgor805490190800.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Rgor805890191990.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Rgor808230201010.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Rgor808310201310.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Rgor808640202850.1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| Rgor809710207370.1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Rgor810400209650.1 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Rgor810980212550.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Rgor812290217680.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Rgor829480220600.1 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Rgor829490220610.1 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| Rgor884550225940.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Rgor884560225970.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Rgor884860226140.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Rgor884870226210.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |