PlantSME Plant secondary metabolism enzyme database

Roridula gorgonias (roridula_gorgonias)

Imported from atlas release summary for Roridula gorgonias.

954
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 282 20 BAHD (126) View species results
Phenylpropanoid pathway 218 13 POD (83) View species results
Alkaloid pathway 216 22 NMT (40) View species results
Flavonoid pathway 91 11 UFGT (28) View species results
Rosmarinic acid pathway 78 7 4CL (27) View species results
Steroid pathway 69 14 CAS (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 199 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Rgor556210004810.1 Rosmarinic Acid 4CL medium pass
Rgor596100005160.1 Rosmarinic Acid 4CL medium pass
Rgor629750007530.1 Rosmarinic Acid 4CL medium pass
Rgor665410010750.1 Rosmarinic Acid 4CL medium pass
Rgor691050015080.1 Rosmarinic Acid 4CL low borderline
Rgor728920025540.1 Rosmarinic Acid 4CL medium pass
Rgor741510031320.1 Rosmarinic Acid 4CL medium pass
Rgor756890041960.1 Rosmarinic Acid 4CL medium pass
Rgor759310044230.1 Rosmarinic Acid 4CL medium pass
Rgor765490052130.1 Rosmarinic Acid 4CL medium pass
Rgor767400054920.1 Rosmarinic Acid 4CL medium pass
Rgor769010057560.1 Rosmarinic Acid 4CL medium pass
Rgor770010059090.1 Rosmarinic Acid 4CL low borderline
Rgor771160061500.1 Rosmarinic Acid 4CL low borderline
Rgor771960063190.1 Rosmarinic Acid 4CL medium pass
Rgor772270063690.1 Rosmarinic Acid 4CL medium pass
Rgor773330065950.1 Rosmarinic Acid 4CL medium pass
Rgor773330065960.1 Rosmarinic Acid 4CL medium pass
Rgor773470066430.1 Rosmarinic Acid 4CL low borderline
Rgor774590069400.1 Rosmarinic Acid 4CL medium pass
Rgor776540074780.1 Rosmarinic Acid 4CL low borderline
Rgor780170085000.1 Rosmarinic Acid 4CL low borderline
Rgor783080093870.1 Rosmarinic Acid 4CL low borderline
Rgor789050116150.1 Rosmarinic Acid 4CL low borderline
Rgor789050116160.1 Rosmarinic Acid 4CL medium pass
Rgor789050116170.1 Rosmarinic Acid 4CL medium pass
Rgor792810131160.1 Rosmarinic Acid 4CL low borderline
Rgor795330143420.1 Rosmarinic Acid 4CL low borderline
Rgor796150147050.1 Rosmarinic Acid 4CL medium pass
Rgor796730150080.1 Rosmarinic Acid 4CL medium pass
Rgor797700154770.1 Rosmarinic Acid 4CL medium pass
Rgor802170176270.1 Rosmarinic Acid 4CL medium pass
Rgor802810179050.1 Rosmarinic Acid 4CL low borderline
Rgor803600182560.1 Rosmarinic Acid 4CL low borderline
Rgor804380186380.1 Rosmarinic Acid 4CL medium pass
Rgor804380186390.1 Rosmarinic Acid 4CL medium pass
Rgor806180193290.1 Rosmarinic Acid 4CL medium pass
Rgor809520206410.1 Rosmarinic Acid 4CL medium pass
Rgor868040225010.1 Rosmarinic Acid 4CL medium pass
Rgor522040003880.1 Rosmarinic Acid C4H low borderline
Rgor545770004330.1 Rosmarinic Acid C4H low borderline
Rgor554090004610.1 Rosmarinic Acid C4H low borderline
Rgor596060005150.1 Rosmarinic Acid C4H low borderline
Rgor609420005840.1 Rosmarinic Acid C4H medium pass
Rgor640230009600.1 Rosmarinic Acid C4H medium pass
Rgor678950012000.1 Rosmarinic Acid C4H low borderline
Rgor684320012370.1 Rosmarinic Acid C4H low borderline
Rgor686450013070.1 Rosmarinic Acid C4H low borderline
Rgor694470015910.1 Rosmarinic Acid C4H low borderline
Rgor701560016630.1 Rosmarinic Acid C4H low borderline