Rosa multiflora (rosa_multiflora)
Imported from atlas release summary for Rosa multiflora.
3404
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3404
Candidate Genes
C4H
6.6%
UGT
5.95%
C3'H/CYP98A
5.46%
BAHD
5.2%
7DLGT
4.93%
UFGT
4.47%
CYP76
3.72%
4CL
3.67%
Other Families
60.01%
More Families (98)
IFS
282
3.55%
T3O
240
3.02%
POD
204
2.57%
F3H
203
2.56%
BR6OX2/CYP85A2
160
2.02%
DWF4/CYP90B1
155
1.95%
F3'H/CYP75B
154
1.94%
NMT
148
1.86%
CAD
142
1.79%
H6H
128
1.61%
CODM/T6ODM
123
1.55%
CAS
122
1.54%
STR
107
1.35%
LAC
102
1.29%
SMT1/SMT2/SMT3
101
1.27%
CYP71
95
1.2%
TRI/TRII
89
1.12%
TPS
87
1.1%
GES
84
1.06%
GS
84
1.06%
HCT
76
0.96%
CSE
76
0.96%
G8O/G8H
70
0.88%
7DLH
69
0.87%
F3'5'H/CYP75A
67
0.84%
SLS
66
0.83%
CYP90D1
63
0.79%
T16H
60
0.76%
FNS
59
0.74%
TAT
59
0.74%
SQE
56
0.71%
IO
54
0.68%
IFR
53
0.67%
SGD
52
0.66%
COR
52
0.66%
COMT
52
0.66%
BR6OX1/CYP85A1
49
0.62%
PMT
47
0.59%
ANR
47
0.59%
RAS
45
0.57%
BBE
44
0.55%
CCR
42
0.53%
F5H/CYP84A
40
0.5%
LAMT
39
0.49%
DFR
38
0.48%
PYKS
37
0.47%
NCS
35
0.44%
8HGO
28
0.35%
CYP51G1
28
0.35%
ANS/LDOX
26
0.33%
HMGR
26
0.33%
CPD/CYP90A1
25
0.32%
16OMT
22
0.28%
CCoAOMT
21
0.26%
HPPR
20
0.25%
CPR
20
0.25%
ISY
18
0.23%
ROT3/CYP90C1
18
0.23%
CYP80B1
15
0.19%
CYP719
15
0.19%
CNMT
14
0.18%
GGPPS
14
0.18%
CHS
13
0.16%
MVK
13
0.16%
PAL
12
0.15%
AACT
12
0.15%
MPO
11
0.14%
ODC
11
0.14%
SQS/FDFT1
9
0.11%
FPPS
9
0.11%
TYDC_DDC
8
0.1%
HDS/IspG
8
0.1%
DET2
7
0.09%
SMO1/SMO2
7
0.09%
MVD
7
0.09%
ADC
6
0.08%
DXS
6
0.08%
XMT_MXMT_DXMT
5
0.06%
6OMT_4OMT_SOMT
4
0.05%
CHI
4
0.05%
DXR
4
0.05%
CMK/IspE
4
0.05%
TDC
3
0.04%
CYP80F1
3
0.04%
DWF7
3
0.04%
IDI
3
0.04%
MCT/IspD
3
0.04%
PMK
3
0.04%
HDR/IspH
3
0.04%
FLS
2
0.03%
DWF1
2
0.03%
DWF5
2
0.03%
HYD1
2
0.03%
GPPS
2
0.03%
FK
1
0.01%
CPI1
1
0.01%
MDS/IspF
1
0.01%
HMGS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1035 | 21 | UGT (446) | View species results |
| Alkaloid pathway | 759 | 25 | 7DLGT (199) | View species results |
| Phenylpropanoid pathway | 577 | 12 | POD (177) | View species results |
| Flavonoid pathway | 474 | 14 | UFGT (324) | View species results |
| Rosmarinic acid pathway | 315 | 7 | C4H (136) | View species results |
| Steroid pathway | 244 | 14 | CAS (101) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2980 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 534 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| RmulRmu_co8289337.10038450.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_co8470451.10074850.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0000837.10153050.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0001534.10198340.v1.475 | Alkaloid | 16OMT | low | borderline |
| RmulRmu_sc0001803.10216350.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0001809.10216800.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0002707.10271370.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0002711.10271660.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0002711.10271670.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0003130.10292880.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0003399.10306330.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0004232.10343010.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0004275.10344400.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0004483.10352840.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0009240.10483580.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0009584.10489310.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0009627.10490000.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0009627.10490010.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0010379.10501000.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0026652.10594340.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_sc0027975.10598230.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_ssc0000008.10635320.v1.475 | Alkaloid | 16OMT | medium | borderline |
| RmulRmu_co8132516.10016450.v1.475 | Alkaloid | 6OMT_4OMT_SOMT | medium | borderline |
| RmulRmu_co8443219.10069080.v1.475 | Alkaloid | 6OMT_4OMT_SOMT | low | borderline |
| RmulRmu_sc0001088.10170250.v1.475 | Alkaloid | 6OMT_4OMT_SOMT | medium | pass |
| RmulRmu_ssc0000396.10666070.v1.475 | Alkaloid | 6OMT_4OMT_SOMT | low | borderline |
| RmulRmu_co7967648.10000840.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8022450.10005360.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8035894.10006530.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8063878.10009580.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8066380.10009820.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8079702.10011070.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8094034.10012470.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8137600.10017060.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8142950.10017660.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8149328.10018480.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8175810.10021440.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8202196.10024840.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8207190.10025720.v1.475 | Alkaloid | 7DLGT | high | pass |
| RmulRmu_co8209284.10026000.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8221948.10027790.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8236829.10029960.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8237817.10030120.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8238891.10030300.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8251247.10032040.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8256977.10032920.v1.475 | Alkaloid | 7DLGT | medium | pass |
| RmulRmu_co8283697.10037410.v1.475 | Alkaloid | 7DLGT | high | pass |
| RmulRmu_co8284467.10037540.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8292439.10038900.v1.475 | Alkaloid | 7DLGT | low | borderline |
| RmulRmu_co8298997.10040260.v1.475 | Alkaloid | 7DLGT | medium | pass |