Salix arbutifolia (salix_arbutifolia)
Imported from atlas release summary for Salix arbutifolia.
1503
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1503
Candidate Genes
C4H
6.1%
C3'H/CYP98A
6.03%
BAHD
5.87%
4CL
4.42%
CYP76
4.22%
IFS
3.72%
POD
3.7%
UGT
3.44%
Other Families
62.49%
More Families (96)
T3O
118
3.05%
F3H
112
2.9%
7DLGT
107
2.77%
NMT
100
2.59%
UFGT
96
2.48%
DWF4/CYP90B1
87
2.25%
F3'H/CYP75B
73
1.89%
BR6OX2/CYP85A2
71
1.84%
STR
70
1.81%
CAD
66
1.71%
H6H
63
1.63%
CODM/T6ODM
57
1.47%
TRI/TRII
56
1.45%
LAC
52
1.35%
TPS
48
1.24%
GES
47
1.22%
SMT1/SMT2/SMT3
47
1.22%
BBE
46
1.19%
IO
44
1.14%
CAS
44
1.14%
GS
43
1.11%
HCT
42
1.09%
CYP71
42
1.09%
CYP90D1
40
1.03%
CCR
39
1.01%
IFR
37
0.96%
TAT
36
0.93%
RAS
35
0.91%
PYKS
33
0.85%
SGD
32
0.83%
CSE
32
0.83%
F3'5'H/CYP75A
28
0.72%
ANR
27
0.7%
T16H
26
0.67%
G8O/G8H
25
0.65%
DFR
23
0.59%
PMT
22
0.57%
7DLH
22
0.57%
NCS
21
0.54%
CPD/CYP90A1
21
0.54%
SLS
19
0.49%
CYP51G1
18
0.47%
COMT
17
0.44%
F5H/CYP84A
16
0.41%
LAMT
15
0.39%
PAL
15
0.39%
FNS
14
0.36%
ISY
12
0.31%
8HGO
12
0.31%
CPR
12
0.31%
BR6OX1/CYP85A1
12
0.31%
CNMT
11
0.28%
COR
10
0.26%
ANS/LDOX
10
0.26%
AACT
10
0.26%
HPPR
9
0.23%
SQE
9
0.23%
GGPPS
9
0.23%
16OMT
8
0.21%
MPO
8
0.21%
CHS
8
0.21%
SQS/FDFT1
8
0.21%
DET2
8
0.21%
HMGR
8
0.21%
MVD
8
0.21%
TDC
7
0.18%
TYDC_DDC
7
0.18%
FPPS
7
0.18%
CYP719
6
0.16%
ROT3/CYP90C1
6
0.16%
CHI
5
0.13%
CCoAOMT
5
0.13%
SMO1/SMO2
5
0.13%
DXS
4
0.1%
MVK
4
0.1%
HMGS
4
0.1%
6OMT_4OMT_SOMT
3
0.08%
CYP80B1
3
0.08%
DWF1
3
0.08%
CMK/IspE
3
0.08%
IDI
3
0.08%
MCT/IspD
3
0.08%
XMT_MXMT_DXMT
2
0.05%
FLS
2
0.05%
DWF7
2
0.05%
HYD1
2
0.05%
DWF5
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
MDS/IspF
2
0.05%
ODC
1
0.03%
ADC
1
0.03%
FK
1
0.03%
CPI1
1
0.03%
PMK
1
0.03%
HDR/IspH
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 435 | 19 | BAHD (169) | View species results |
| Phenylpropanoid pathway | 328 | 11 | POD (132) | View species results |
| Alkaloid pathway | 326 | 18 | NMT (51) | View species results |
| Flavonoid pathway | 167 | 8 | UFGT (83) | View species results |
| Rosmarinic acid pathway | 154 | 7 | C4H (54) | View species results |
| Steroid pathway | 93 | 12 | CAS (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1453 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 304 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| salix_arbutifolia_GWHPBDOB015122 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| salix_arbutifolia_GWHPBDOB015806 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| salix_arbutifolia_GWHPBDOB015807 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| salix_arbutifolia_GWHPBDOB016888 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| salix_arbutifolia_GWHPBDOB017003 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| salix_arbutifolia_GWHPBDOB017258 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00017__sp_Q9S725_4CL2_ARATH |
| salix_arbutifolia_GWHPBDOB017388 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| salix_arbutifolia_GWHPBDOB019031 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| salix_arbutifolia_GWHPBDOB020131 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| salix_arbutifolia_GWHPBDOB020184 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| salix_arbutifolia_GWHPBDOB021440 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| salix_arbutifolia_GWHPBDOB024134 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| salix_arbutifolia_GWHPBDOB024819 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| salix_arbutifolia_GWHPBDOB025163 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| salix_arbutifolia_GWHPBDOB025495 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| salix_arbutifolia_GWHPBDOB026236 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| salix_arbutifolia_GWHPBDOB026480 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| salix_arbutifolia_GWHPBDOB027896 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| salix_arbutifolia_GWHPBDOB028767 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| salix_arbutifolia_GWHPBDOB028768 | Rosmarinic Acid | 4CL | low | borderline | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| salix_arbutifolia_GWHPBDOB029468 | Rosmarinic Acid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |