PlantSME Plant secondary metabolism enzyme database

Salix dunnii (salix_dunnii)

Imported from atlas release summary for Salix dunnii.

1253
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.76% Phenylpropanoid pathway 21.39% Alkaloid pathway 20.67% Flavonoid pathway 11.49% Rosmarinic acid pathway 8.46% Steroid pathway 6.23%
Family Distribution
BAHD 7.03% C4H 5.67% C3'H/CYP98A 5.11% 4CL 4.22% CYP76 3.72% POD 3.69% UGT 3.4% IFS 3.01%
Other Families 64.15%
More Families (97)
F3H 97 2.86% 7DLGT 94 2.78% NMT 88 2.6% UFGT 78 2.3% DWF4/CYP90B1 77 2.27% T3O 73 2.16% F3'H/CYP75B 73 2.16% STR 66 1.95% CAD 58 1.71% BR6OX2/CYP85A2 57 1.68% H6H 55 1.62% CODM/T6ODM 54 1.59% LAC 52 1.54% SMT1/SMT2/SMT3 46 1.36% CAS 45 1.33% HCT 42 1.24% F5H/CYP84A 39 1.15% IFR 38 1.12% GS 37 1.09% TAT 37 1.09% CYP71 37 1.09% CSE 35 1.03% PYKS 34 1.0% G8O/G8H 34 1.0% IO 33 0.97% RAS 33 0.97% T16H 32 0.95% F3'5'H/CYP75A 32 0.95% TPS 30 0.89% COMT 29 0.86% CCR 28 0.83% GES 27 0.8% SGD 26 0.77% ANR 26 0.77% CYP90D1 26 0.77% TRI/TRII 25 0.74% PMT 24 0.71% SLS 21 0.62% 16OMT 20 0.59% CPD/CYP90A1 20 0.59% 7DLH 19 0.56% FNS 19 0.56% BR6OX1/CYP85A1 19 0.56% DFR 18 0.53% 8HGO 17 0.5% NCS 17 0.5% ANS/LDOX 15 0.44% PAL 15 0.44% CYP719 14 0.41% ISY 12 0.35% CYP80B1 12 0.35% CHS 11 0.32% ROT3/CYP90C1 11 0.32% SQS/FDFT1 11 0.32% MPO 10 0.3% DET2 10 0.3% GGPPS 10 0.3% LAMT 9 0.27% CPR 9 0.27% AACT 9 0.27% CNMT 8 0.24% COR 8 0.24% HPPR 8 0.24% CYP51G1 7 0.21% FPPS 7 0.21% CYP80F1 6 0.18% DXS 6 0.18% HMGR 6 0.18% MVK 6 0.18% MVD 6 0.18% CCoAOMT 5 0.15% SMO1/SMO2 5 0.15% CHI 4 0.12% HYD1 4 0.12% CMK/IspE 4 0.12% TYDC_DDC 3 0.09% TDC 3 0.09% FLS 3 0.09% MCT/IspD 3 0.09% SQE 2 0.06% DWF1 2 0.06% DWF5 2 0.06% FK 2 0.06% DXR 2 0.06% HDS/IspG 2 0.06% HMGS 2 0.06% BBE 1 0.03% XMT_MXMT_DXMT 1 0.03% 6OMT_4OMT_SOMT 1 0.03% ADC 1 0.03% ODC 1 0.03% DWF7 1 0.03% CPI1 1 0.03% IDI 1 0.03% HDR/IspH 1 0.03% PMK 1 0.03% MDS/IspF 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 398 20 BAHD (169) View species results
Phenylpropanoid pathway 268 11 POD (96) View species results
Alkaloid pathway 259 21 NMT (49) View species results
Flavonoid pathway 144 9 UFGT (69) View species results
Rosmarinic acid pathway 106 7 4CL (29) View species results
Steroid pathway 78 11 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1235 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 313 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
salix_dunnii_KAF9665117.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
salix_dunnii_KAF9665119.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
salix_dunnii_KAF9671239.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
salix_dunnii_KAF9673855.1 Alkaloid COR low borderline COR__00002__sp_Q9SQ67_COR14_PAPSO
salix_dunnii_KAF9677526.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
salix_dunnii_KAF9677925.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
salix_dunnii_KAF9679957.1 Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
salix_dunnii_KAF9689524.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO