PlantSME Plant secondary metabolism enzyme database

Salvia bowleyana (salvia_bowleyana)

Imported from atlas release summary for Salvia bowleyana.

1745
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.23% Phenylpropanoid pathway 19.26% Alkaloid pathway 19.14% Flavonoid pathway 14.21% Rosmarinic acid pathway 11.46% Steroid pathway 4.7%
Family Distribution
C4H 7.27% C3'H/CYP98A 6.75% BAHD 5.66% T3O 4.36% UGT 4.36% 7DLGT 3.9% UFGT 3.9% IFS 3.86%
Other Families 59.94%
More Families (96)
CYP76 178 3.73% 4CL 177 3.71% F3'H/CYP75B 136 2.85% DWF4/CYP90B1 124 2.6% F3H 107 2.24% POD 105 2.2% BR6OX2/CYP85A2 97 2.03% CYP71 87 1.82% CAD 81 1.7% LAC 79 1.66% CODM/T6ODM 78 1.64% TPS 66 1.38% GES 62 1.3% CAS 62 1.3% STR 59 1.24% HCT 59 1.24% FPPS 52 1.09% CYP90D1 51 1.07% TAT 49 1.03% 7DLH 47 0.99% BBE 45 0.94% NMT 45 0.94% RAS 43 0.9% H6H 41 0.86% T16H 38 0.8% PMT 38 0.8% PAL 36 0.75% SMT1/SMT2/SMT3 35 0.73% PYKS 34 0.71% GS 32 0.67% CSE 31 0.65% CYP51G1 31 0.65% IFR 30 0.63% COMT 30 0.63% G8O/G8H 29 0.61% LAMT 28 0.59% TRI/TRII 27 0.57% 16OMT 26 0.55% ANR 26 0.55% FNS 23 0.48% CPD/CYP90A1 23 0.48% IO 22 0.46% SLS 22 0.46% SGD 20 0.42% F3'5'H/CYP75A 19 0.4% F5H/CYP84A 18 0.38% NCS 17 0.36% CCR 17 0.36% CNMT 16 0.34% ANS/LDOX 15 0.31% BR6OX1/CYP85A1 15 0.31% DFR 13 0.27% GGPPS 12 0.25% 8HGO 11 0.23% COR 11 0.23% CCoAOMT 11 0.23% CYP80B1 10 0.21% HPPR 10 0.21% MVK 10 0.21% CYP719 9 0.19% CHS 9 0.19% ROT3/CYP90C1 9 0.19% AACT 9 0.19% HMGR 9 0.19% SQS/FDFT1 8 0.17% DXS 8 0.17% MPO 7 0.15% 6OMT_4OMT_SOMT 7 0.15% CPR 6 0.13% XMT_MXMT_DXMT 5 0.1% CHI 5 0.1% TDC 4 0.08% SQE 4 0.08% TYDC_DDC 3 0.06% FLS 3 0.06% DET2 3 0.06% HDR/IspH 3 0.06% MVD 3 0.06% MCT/IspD 3 0.06% CYP80F1 2 0.04% ADC 2 0.04% ISY 2 0.04% DWF5 2 0.04% SMO1/SMO2 2 0.04% FK 2 0.04% DWF1 2 0.04% DXR 2 0.04% PMK 2 0.04% ODC 1 0.02% CPI1 1 0.02% HYD1 1 0.02% DWF7 1 0.02% HMGS 1 0.02% CMK/IspE 1 0.02% MDS/IspF 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 545 17 BAHD (194) View species results
Phenylpropanoid pathway 336 12 POD (95) View species results
Alkaloid pathway 334 22 7DLGT (89) View species results
Flavonoid pathway 248 11 UFGT (168) View species results
Rosmarinic acid pathway 200 7 C4H (93) View species results
Steroid pathway 82 12 CAS (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2028 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 372 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HMGR
Reset
Gene Pathway Family Confidence Status Best Target
Sbow01G0075430.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Sbow02G0027340.1 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Sbow03G0054840.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Sbow03G0054850.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Sbow03G0057430.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Sbow03G0057440.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Sbow05G0014670.1 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Sbow08G0008010.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Sbow08G0008020.1 Terpenoid HMGR low borderline HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI