PlantSME Plant secondary metabolism enzyme database

Salvia rosmarinus (salvia_rosmarinus)

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Imported from atlas release summary for Salvia rosmarinus.

2301
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 746 19 BAHD (296) View species results
Phenylpropanoid pathway 455 11 POD (189) View species results
Alkaloid pathway 440 21 NMT (98) View species results
Flavonoid pathway 276 14 UFGT (172) View species results
Rosmarinic acid pathway 242 7 C4H (111) View species results
Steroid pathway 142 14 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2362 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 470 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
salvia_rosmarinus_1029.g62.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g63.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g64.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g65.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g66.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g67.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g68.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g69.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1029.g85.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1030.g971.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1062.g183.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1086.g7.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1086.g9.t1.2.5db2112d Alkaloid 7DLH medium borderline
salvia_rosmarinus_1153.g307.t1.2.5db21168 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1153.g375.t1 Alkaloid 7DLH low borderline
salvia_rosmarinus_1153.g375.t1.1.5db2116b Alkaloid 7DLH low borderline
salvia_rosmarinus_1153.g375.t1.2.5db2116b Alkaloid 7DLH low borderline
salvia_rosmarinus_1153.g900.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1260.g8.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1268.g7.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1273.g274.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1331.g226.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1331.g227.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1331.g227.t1.1.5db21188 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1331.g228.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1331.g228.t1.1.5db21188 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1437.g220.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_1988.g1.t1 Alkaloid 7DLH low borderline
salvia_rosmarinus_203005.g1.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_2664.g1.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_2664.g12.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_308132.g1.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_339379.g2.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_346449.g1.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_378385.g1.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_378385.g1.t1.1.5db21250 Alkaloid 7DLH medium borderline
salvia_rosmarinus_382991.g1.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_383858.g1.t1 Alkaloid 7DLH low borderline
salvia_rosmarinus_386658.g1.t1 Alkaloid 7DLH low borderline
salvia_rosmarinus_392640.g1.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_392958.g6.t1 Alkaloid 7DLH medium borderline
salvia_rosmarinus_811.g103.t1 Alkaloid 7DLH medium borderline