PlantSME Plant secondary metabolism enzyme database

Salvia rosmarinus (salvia_rosmarinus)

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Imported from atlas release summary for Salvia rosmarinus.

2301
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 746 19 BAHD (296) View species results
Phenylpropanoid pathway 455 11 POD (189) View species results
Alkaloid pathway 440 21 NMT (98) View species results
Flavonoid pathway 276 14 UFGT (172) View species results
Rosmarinic acid pathway 242 7 C4H (111) View species results
Steroid pathway 142 14 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2362 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 470 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
salvia_rosmarinus_345875.g2.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
salvia_rosmarinus_346652.g1.t1 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
salvia_rosmarinus_350723.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_350723.g3.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
salvia_rosmarinus_352903.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_355767.g3.t1 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
salvia_rosmarinus_363950.g3.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_363950.g4.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_366942.g2.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_383476.g1.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
salvia_rosmarinus_387650.g1.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_390871.g1.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_391361.g9.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
salvia_rosmarinus_811.g145.t1 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
salvia_rosmarinus_811.g149.t1 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
salvia_rosmarinus_811.g149.t1.1.5db21280 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
salvia_rosmarinus_830.g381.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_830.g525.t1 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_830.g525.t1.1.5db2128a Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_830.g525.t1.2.5db2128a Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_830.g525.t1.3.5db2128a Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
salvia_rosmarinus_830.g525.t1.4.5db2128a Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH