PlantSME Plant secondary metabolism enzyme database

Salvia rosmarinus (salvia_rosmarinus)

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Imported from atlas release summary for Salvia rosmarinus.

2927
Candidate Protein Records
2301
Pathway-Level Records
5897
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 746 19 BAHD (296) View species results
Phenylpropanoid pathway 455 11 POD (189) View species results
Alkaloid pathway 440 21 NMT (98) View species results
Flavonoid pathway 276 14 UFGT (172) View species results
Rosmarinic acid pathway 242 7 C4H (111) View species results
Steroid pathway 142 14 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2362 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 470 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
salvia_rosmarinus_387957.g2.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_388074.g1.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_388150.g9.t1 Alkaloid T3O medium pass
salvia_rosmarinus_389140.g26.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_389195.g14.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_389797.g5.t1 Alkaloid T3O low borderline
salvia_rosmarinus_390016.g1.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_390016.g4.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_390016.g5.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_390016.g7.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_391830.g1.t1 Alkaloid T3O low borderline
salvia_rosmarinus_393486.g1.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_393833.g78.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_566121.g2.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_585161.g6.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_585162.g6.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_585162.g6.t1.1.5db2127c Alkaloid T3O medium borderline
salvia_rosmarinus_585163.g1.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_585164.g1.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_587146.g2.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_587147.g2.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_811.g112.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_811.g113.t1_811.g114.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_811.g125.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_811.g127.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_811.g363.t1 Alkaloid T3O low borderline
salvia_rosmarinus_811.g419.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_811.g82.t1_811.g83.t1 Alkaloid T3O medium borderline
salvia_rosmarinus_830.g75.t1 Alkaloid T3O low borderline