PlantSME Plant secondary metabolism enzyme database

Salvia rosmarinus (salvia_rosmarinus)

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Imported from atlas release summary for Salvia rosmarinus.

2927
Candidate Protein Records
2301
Pathway-Level Records
5897
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 746 19 BAHD (296) View species results
Phenylpropanoid pathway 455 11 POD (189) View species results
Alkaloid pathway 440 21 NMT (98) View species results
Flavonoid pathway 276 14 UFGT (172) View species results
Rosmarinic acid pathway 242 7 C4H (111) View species results
Steroid pathway 142 14 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2362 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 470 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
salvia_rosmarinus_2743.g338.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_2760.g13.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_2760.g28.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_2760.g29.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_2760.g41.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_2808.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_284066.g2.t1 Flavonoid UFGT low borderline
salvia_rosmarinus_295193.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_312901.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_317108.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_317110.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_329076.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_332084.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_341130.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_341710.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_345563.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_345563.g2.t1 Flavonoid UFGT high pass
salvia_rosmarinus_347733.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_348342.g1.t1 Flavonoid UFGT low borderline
salvia_rosmarinus_349505.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_351260.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_354383.g1.t1 Flavonoid UFGT low borderline
salvia_rosmarinus_354397.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_355716.g3.t1 Flavonoid UFGT low borderline
salvia_rosmarinus_363777.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_363896.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_363896.g4.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_366765.g3.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_367235.g2.t1 Flavonoid UFGT low borderline
salvia_rosmarinus_367235.g3.t1 Flavonoid UFGT high pass
salvia_rosmarinus_372133.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_372317.g1.t1 Flavonoid UFGT low borderline
salvia_rosmarinus_373223.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_374033.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_377813.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_377813.g3.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_382340.g3.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_382340.g4.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_383102.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_383365.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_383922.g14.t1 Flavonoid UFGT high pass
salvia_rosmarinus_384961.g3.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_385700.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_385931.g1.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_387008.g17.t1 Flavonoid UFGT low borderline
salvia_rosmarinus_387995.g2.t1 Flavonoid UFGT high pass
salvia_rosmarinus_388150.g1.t1 Flavonoid UFGT high pass
salvia_rosmarinus_388150.g14.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_388150.g2.t1 Flavonoid UFGT medium pass
salvia_rosmarinus_388150.g23.t1 Flavonoid UFGT high pass