PlantSME Plant secondary metabolism enzyme database

Santalum album (santalum_album)

Imported from atlas release summary for Santalum album.

975
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.15% Alkaloid pathway 22.67% Phenylpropanoid pathway 20.51% Flavonoid pathway 11.9% Rosmarinic acid pathway 10.05% Steroid pathway 4.72%
Family Distribution
C3'H/CYP98A 6.17% C4H 5.76% BAHD 5.76% POD 4.37% CYP76 3.99% UGT 3.8% IFS 3.46% 7DLGT 3.39%
Other Families 63.29%
More Families (96)
UFGT 88 3.31% T3O 83 3.12% 4CL 75 2.82% DWF4/CYP90B1 75 2.82% F3H 73 2.75% CAD 68 2.56% NMT 65 2.45% F3'H/CYP75B 58 2.18% BR6OX2/CYP85A2 48 1.81% SMT1/SMT2/SMT3 46 1.73% CODM/T6ODM 45 1.69% GS 41 1.54% TPS 41 1.54% STR 40 1.51% CAS 40 1.51% GES 39 1.47% H6H 35 1.32% BBE 31 1.17% TRI/TRII 30 1.13% IFR 27 1.02% CSE 25 0.94% 7DLH 24 0.9% RAS 24 0.9% LAC 23 0.87% CYP90D1 23 0.87% IO 22 0.83% T16H 22 0.83% PYKS 21 0.79% CYP71 21 0.79% HCT 19 0.72% G8O/G8H 18 0.68% F3'5'H/CYP75A 18 0.68% COMT 18 0.68% CCR 16 0.6% 16OMT 14 0.53% FNS 14 0.53% ANR 14 0.53% CPD/CYP90A1 14 0.53% PMT 13 0.49% COR 13 0.49% SGD 11 0.41% DFR 11 0.41% TAT 11 0.41% F5H/CYP84A 10 0.38% FPPS 10 0.38% LAMT 9 0.34% CYP719 9 0.34% PAL 9 0.34% BR6OX1/CYP85A1 9 0.34% GGPPS 9 0.34% SLS 8 0.3% 8HGO 8 0.3% CNMT 8 0.3% CYP51G1 8 0.3% DXS 8 0.3% ANS/LDOX 7 0.26% CPR 7 0.26% HPPR 7 0.26% MPO 6 0.23% CCoAOMT 6 0.23% AACT 6 0.23% SMO1/SMO2 5 0.19% ROT3/CYP90C1 5 0.19% SQS/FDFT1 5 0.19% NCS 4 0.15% CHS 4 0.15% HYD1 4 0.15% ODC 3 0.11% 6OMT_4OMT_SOMT 3 0.11% TYDC_DDC 3 0.11% TDC 3 0.11% DET2 3 0.11% HMGR 3 0.11% MVK 3 0.11% MVD 3 0.11% ADC 2 0.08% ISY 2 0.08% CHI 2 0.08% CPI1 2 0.08% SQE 2 0.08% DWF1 2 0.08% HMGS 2 0.08% IDI 2 0.08% XMT_MXMT_DXMT 1 0.04% CYP80F1 1 0.04% CYP80B1 1 0.04% DWF7 1 0.04% FK 1 0.04% DWF5 1 0.04% MDS/IspF 1 0.04% DXR 1 0.04% HDS/IspG 1 0.04% PMK 1 0.04% HDR/IspH 1 0.04% CMK/IspE 1 0.04% MCT/IspD 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 294 20 BAHD (98) View species results
Alkaloid pathway 221 17 GES (34) View species results
Phenylpropanoid pathway 200 11 POD (85) View species results
Flavonoid pathway 116 8 UFGT (82) View species results
Rosmarinic acid pathway 98 7 C4H (50) View species results
Steroid pathway 46 10 CAS (21) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 992 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 196 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
santalum_album_GWHPCBHT004038 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT004039 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT004595 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT012569 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT012798 Steroid CPD/CYP90A1 medium borderline
santalum_album_GWHPCBHT013390 Steroid CPD/CYP90A1 medium borderline
santalum_album_GWHPCBHT017304 Steroid CPD/CYP90A1 medium borderline
santalum_album_GWHPCBHT018076 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT022038 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT023140 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT023903 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT024343 Steroid CPD/CYP90A1 medium borderline
santalum_album_GWHPCBHT024413 Steroid CPD/CYP90A1 low borderline
santalum_album_GWHPCBHT024505 Steroid CPD/CYP90A1 medium borderline