PlantSME Plant secondary metabolism enzyme database

Santalum yasi (santalum_yasi)

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Imported from atlas release summary for Santalum yasi.

1033
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.49% Alkaloid pathway 21.2% Phenylpropanoid pathway 20.91% Flavonoid pathway 12.78% Rosmarinic acid pathway 9.1% Steroid pathway 5.52%
Family Distribution
C3'H/CYP98A 6.16% BAHD 6.16% C4H 5.06% POD 4.43% UGT 4.16% 7DLGT 3.92% UFGT 3.92% CYP76 3.73%
Other Families 62.44%
More Families (96)
IFS 89 3.49% 4CL 87 3.41% T3O 75 2.94% F3H 72 2.83% DWF4/CYP90B1 68 2.67% NMT 61 2.39% F3'H/CYP75B 58 2.28% CAD 49 1.92% BR6OX2/CYP85A2 46 1.81% SMT1/SMT2/SMT3 45 1.77% STR 43 1.69% CODM/T6ODM 41 1.61% H6H 35 1.37% TPS 33 1.3% GES 32 1.26% CAS 32 1.26% TRI/TRII 31 1.22% CSE 29 1.14% BBE 28 1.1% GS 27 1.06% LAC 27 1.06% IFR 24 0.94% RAS 24 0.94% CYP71 23 0.9% G8O/G8H 22 0.86% 7DLH 21 0.82% T16H 21 0.82% PYKS 21 0.82% ANR 21 0.82% CCR 19 0.75% HCT 19 0.75% CYP90D1 19 0.75% IO 18 0.71% F3'5'H/CYP75A 16 0.63% PMT 14 0.55% 16OMT 13 0.51% COMT 13 0.51% CPD/CYP90A1 13 0.51% SLS 12 0.47% SGD 12 0.47% FNS 12 0.47% LAMT 11 0.43% COR 11 0.43% TAT 10 0.39% CNMT 9 0.35% 8HGO 9 0.35% PAL 9 0.35% ROT3/CYP90C1 9 0.35% FPPS 9 0.35% GGPPS 8 0.31% HPPR 7 0.27% CPR 7 0.27% MPO 6 0.24% CYP719 6 0.24% F5H/CYP84A 6 0.24% CYP51G1 6 0.24% AACT 6 0.24% DFR 5 0.2% ANS/LDOX 5 0.2% CCoAOMT 5 0.2% SMO1/SMO2 5 0.2% DXS 5 0.2% NCS 4 0.16% CHS 4 0.16% DET2 4 0.16% BR6OX1/CYP85A1 4 0.16% MVK 4 0.16% MVD 4 0.16% TYDC_DDC 3 0.12% ODC 3 0.12% SQS/FDFT1 3 0.12% HYD1 3 0.12% HMGR 3 0.12% ADC 2 0.08% ISY 2 0.08% TDC 2 0.08% CHI 2 0.08% DWF7 2 0.08% CPI1 2 0.08% SQE 2 0.08% HMGS 2 0.08% IDI 2 0.08% MCT/IspD 2 0.08% 6OMT_4OMT_SOMT 1 0.04% XMT_MXMT_DXMT 1 0.04% CYP80B1 1 0.04% FLS 1 0.04% DWF1 1 0.04% FK 1 0.04% DWF5 1 0.04% MDS/IspF 1 0.04% DXR 1 0.04% HDS/IspG 1 0.04% PMK 1 0.04% CMK/IspE 1 0.04% HDR/IspH 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 315 19 BAHD (113) View species results
Alkaloid pathway 219 19 7DLGT (38) View species results
Phenylpropanoid pathway 216 11 POD (98) View species results
Flavonoid pathway 132 9 UFGT (93) View species results
Rosmarinic acid pathway 94 7 C4H (45) View species results
Steroid pathway 57 12 CAS (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 914 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 200 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
santalum_yasi_GWHPCBIR003194 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR003257 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR005991 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR006101 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR007100 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR009832 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR010364 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR011939 Alkaloid IO low borderline
santalum_yasi_GWHPCBIR014010 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR014093 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR014769 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR015242 Alkaloid IO low borderline
santalum_yasi_GWHPCBIR015245 Alkaloid IO low borderline
santalum_yasi_GWHPCBIR015736 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR018344 Alkaloid IO low borderline
santalum_yasi_GWHPCBIR018562 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR019257 Alkaloid IO medium borderline
santalum_yasi_GWHPCBIR019259 Alkaloid IO medium borderline