Santalum yasi (santalum_yasi)
/
Imported from atlas release summary for Santalum yasi.
1033
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1033
Candidate Genes
C3'H/CYP98A
6.16%
BAHD
6.16%
C4H
5.06%
POD
4.43%
UGT
4.16%
7DLGT
3.92%
UFGT
3.92%
CYP76
3.73%
Other Families
62.44%
More Families (96)
IFS
89
3.49%
4CL
87
3.41%
T3O
75
2.94%
F3H
72
2.83%
DWF4/CYP90B1
68
2.67%
NMT
61
2.39%
F3'H/CYP75B
58
2.28%
CAD
49
1.92%
BR6OX2/CYP85A2
46
1.81%
SMT1/SMT2/SMT3
45
1.77%
STR
43
1.69%
CODM/T6ODM
41
1.61%
H6H
35
1.37%
TPS
33
1.3%
GES
32
1.26%
CAS
32
1.26%
TRI/TRII
31
1.22%
CSE
29
1.14%
BBE
28
1.1%
GS
27
1.06%
LAC
27
1.06%
IFR
24
0.94%
RAS
24
0.94%
CYP71
23
0.9%
G8O/G8H
22
0.86%
7DLH
21
0.82%
T16H
21
0.82%
PYKS
21
0.82%
ANR
21
0.82%
CCR
19
0.75%
HCT
19
0.75%
CYP90D1
19
0.75%
IO
18
0.71%
F3'5'H/CYP75A
16
0.63%
PMT
14
0.55%
16OMT
13
0.51%
COMT
13
0.51%
CPD/CYP90A1
13
0.51%
SLS
12
0.47%
SGD
12
0.47%
FNS
12
0.47%
LAMT
11
0.43%
COR
11
0.43%
TAT
10
0.39%
CNMT
9
0.35%
8HGO
9
0.35%
PAL
9
0.35%
ROT3/CYP90C1
9
0.35%
FPPS
9
0.35%
GGPPS
8
0.31%
HPPR
7
0.27%
CPR
7
0.27%
MPO
6
0.24%
CYP719
6
0.24%
F5H/CYP84A
6
0.24%
CYP51G1
6
0.24%
AACT
6
0.24%
DFR
5
0.2%
ANS/LDOX
5
0.2%
CCoAOMT
5
0.2%
SMO1/SMO2
5
0.2%
DXS
5
0.2%
NCS
4
0.16%
CHS
4
0.16%
DET2
4
0.16%
BR6OX1/CYP85A1
4
0.16%
MVK
4
0.16%
MVD
4
0.16%
TYDC_DDC
3
0.12%
ODC
3
0.12%
SQS/FDFT1
3
0.12%
HYD1
3
0.12%
HMGR
3
0.12%
ADC
2
0.08%
ISY
2
0.08%
TDC
2
0.08%
CHI
2
0.08%
DWF7
2
0.08%
CPI1
2
0.08%
SQE
2
0.08%
HMGS
2
0.08%
IDI
2
0.08%
MCT/IspD
2
0.08%
6OMT_4OMT_SOMT
1
0.04%
XMT_MXMT_DXMT
1
0.04%
CYP80B1
1
0.04%
FLS
1
0.04%
DWF1
1
0.04%
FK
1
0.04%
DWF5
1
0.04%
MDS/IspF
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
HDR/IspH
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 315 | 19 | BAHD (113) | View species results |
| Alkaloid pathway | 219 | 19 | 7DLGT (38) | View species results |
| Phenylpropanoid pathway | 216 | 11 | POD (98) | View species results |
| Flavonoid pathway | 132 | 9 | UFGT (93) | View species results |
| Rosmarinic acid pathway | 94 | 7 | C4H (45) | View species results |
| Steroid pathway | 57 | 12 | CAS (25) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 914 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 200 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| santalum_yasi_GWHPCBIR008276 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR008277 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR008278 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR008378 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR008766 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR008767 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR008768 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR008769 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR009112 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR009113 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR009114 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR009137 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR009830 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR009832 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR009857 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR009863 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR010059 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR010364 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR011071 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR011285 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR011328 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR012091 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR012274 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR012278 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR013147 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR014010 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR014093 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR014094 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR014095 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR014096 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR014769 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR014984 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR015736 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR015966 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR015969 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR016367 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR016650 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR017998 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR018494 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR018562 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR018704 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR019067 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR019151 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR019205 | Rosmarinic Acid | C4H | medium | pass |
| santalum_yasi_GWHPCBIR019206 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR019207 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR019257 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR019259 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR019421 | Rosmarinic Acid | C4H | low | borderline |
| santalum_yasi_GWHPCBIR020621 | Rosmarinic Acid | C4H | low | borderline |