PlantSME Plant secondary metabolism enzyme database

Saururus chinensis (saururus_chinensis)

Imported from atlas release summary for Saururus chinensis.

1650
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.67% Alkaloid pathway 21.15% Phenylpropanoid pathway 19.52% Flavonoid pathway 11.82% Rosmarinic acid pathway 11.33% Steroid pathway 5.52%
Family Distribution
C4H 8.19% C3'H/CYP98A 6.79% CYP76 5.86% BAHD 4.72% IFS 3.89% T3O 3.65% 4CL 3.56% POD 3.04%
Other Families 60.31%
More Families (97)
UGT 128 3.04% UFGT 113 2.68% 7DLGT 112 2.66% F3'H/CYP75B 112 2.66% BR6OX2/CYP85A2 99 2.35% DWF4/CYP90B1 93 2.21% PAL 90 2.14% TPS 90 2.14% NMT 75 1.78% GES 75 1.78% F3H 66 1.57% STR 65 1.54% COMT 61 1.45% CAS 58 1.38% CAD 50 1.19% G8O/G8H 49 1.16% HCT 49 1.16% IO 48 1.14% IFR 45 1.07% RAS 44 1.04% SMT1/SMT2/SMT3 42 1.0% CYP90D1 40 0.95% H6H 37 0.88% TRI/TRII 35 0.83% PMT 34 0.81% T16H 34 0.81% CYP71 33 0.78% CODM/T6ODM 30 0.71% NCS 29 0.69% PYKS 29 0.69% 16OMT 29 0.69% FNS 29 0.69% F3'5'H/CYP75A 29 0.69% BR6OX1/CYP85A1 29 0.69% CPD/CYP90A1 28 0.66% CYP719 26 0.62% TAT 26 0.62% SLS 25 0.59% CYP80B1 24 0.57% GS 23 0.55% CSE 21 0.5% LAC 21 0.5% SGD 19 0.45% F5H/CYP84A 19 0.45% GGPPS 17 0.4% CCR 16 0.38% CYP51G1 16 0.38% BBE 15 0.36% CCoAOMT 15 0.36% FPPS 15 0.36% 6OMT_4OMT_SOMT 14 0.33% 8HGO 13 0.31% CNMT 13 0.31% ANR 13 0.31% LAMT 12 0.28% TYDC_DDC 10 0.24% SQS/FDFT1 10 0.24% ISY 9 0.21% DFR 8 0.19% CHS 8 0.19% AACT 8 0.19% COR 7 0.17% 7DLH 7 0.17% ROT3/CYP90C1 7 0.17% MPO 6 0.14% ANS/LDOX 6 0.14% CPR 6 0.14% MVK 6 0.14% TDC 5 0.12% SQE 5 0.12% DET2 5 0.12% CHI 4 0.09% DXS 4 0.09% MVD 4 0.09% CMK/IspE 4 0.09% IDI 4 0.09% HPPR 3 0.07% DWF1 3 0.07% HMGR 3 0.07% XMT_MXMT_DXMT 2 0.05% DWF7 2 0.05% CPI1 2 0.05% FK 2 0.05% SMO1/SMO2 2 0.05% DWF5 2 0.05% MCT/IspD 2 0.05% HDR/IspH 2 0.05% PMK 2 0.05% GPPS 2 0.05% CYP80F1 1 0.02% ADC 1 0.02% FLS 1 0.02% HYD1 1 0.02% HDS/IspG 1 0.02% HMGS 1 0.02% DXR 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 506 19 BAHD (157) View species results
Alkaloid pathway 349 24 GES (65) View species results
Phenylpropanoid pathway 322 11 POD (116) View species results
Flavonoid pathway 195 10 UFGT (102) View species results
Rosmarinic acid pathway 187 7 C4H (83) View species results
Steroid pathway 91 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1915 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 292 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
SAchi02G0024480.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
SAchi03G0013010.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
SAchi04G0003600.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
SAchi05G0004250.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
SAchi05G0005610.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
SAchi05G0005620.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
SAchi07G0014680.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO