PlantSME Plant secondary metabolism enzyme database

Schistostega pennata (schistostega_pennata)

Imported from atlas release summary for Schistostega pennata.

528
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 24.43% Phenylpropanoid pathway 23.86% Alkaloid pathway 21.21% Flavonoid pathway 12.12% Rosmarinic acid pathway 11.36% Steroid pathway 7.01%
Family Distribution
BAHD 6.75% C3'H/CYP98A 5.72% 4CL 5.28% C4H 5.28% POD 4.84% NMT 4.4% CYP76 4.33% STR 3.01%
Other Families 60.38%
More Families (97)
T3O 36 2.64% PAL 36 2.64% IFS 35 2.57% IFR 33 2.42% F3H 31 2.27% F3'H/CYP75B 30 2.2% DWF4/CYP90B1 29 2.13% GS 27 1.98% BR6OX2/CYP85A2 25 1.83% CODM/T6ODM 22 1.61% UGT 22 1.61% PYKS 21 1.54% UFGT 21 1.54% 7DLGT 19 1.39% CHS 15 1.1% F3'5'H/CYP75A 15 1.1% HCT 14 1.03% CPR 14 1.03% SMT1/SMT2/SMT3 14 1.03% H6H 13 0.95% IO 13 0.95% CAD 13 0.95% CAS 12 0.88% SLS 10 0.73% G8O/G8H 10 0.73% CSE 10 0.73% CYP71 10 0.73% T16H 9 0.66% CCR 9 0.66% RAS 9 0.66% TRI/TRII 8 0.59% 7DLH 8 0.59% SQS/FDFT1 8 0.59% PMT 7 0.51% COR 7 0.51% 8HGO 7 0.51% CNMT 7 0.51% DFR 7 0.51% LAC 7 0.51% COMT 7 0.51% CYP90D1 7 0.51% FPPS 7 0.51% CYP80B1 6 0.44% 16OMT 6 0.44% TDC 6 0.44% BR6OX1/CYP85A1 6 0.44% AACT 6 0.44% GGPPS 6 0.44% NCS 5 0.37% SGD 5 0.37% ANR 5 0.37% F5H/CYP84A 5 0.37% TAT 5 0.37% CPD/CYP90A1 5 0.37% MCT/IspD 5 0.37% DXR 5 0.37% ADC 4 0.29% FNS 4 0.29% CHI 4 0.29% CYP51G1 4 0.29% MVD 4 0.29% MPO 3 0.22% LAMT 3 0.22% DWF5 3 0.22% ROT3/CYP90C1 3 0.22% DET2 3 0.22% SQE 3 0.22% HDS/IspG 3 0.22% MVK 3 0.22% CYP719 2 0.15% BBE 2 0.15% ISY 2 0.15% XMT_MXMT_DXMT 2 0.15% FLS 2 0.15% CCoAOMT 2 0.15% HPPR 2 0.15% DWF7 2 0.15% SMO1/SMO2 2 0.15% PMK 2 0.15% HMGS 2 0.15% CYP80F1 1 0.07% GES 1 0.07% 6OMT_4OMT_SOMT 1 0.07% TYDC_DDC 1 0.07% ANS/LDOX 1 0.07% DWF1 1 0.07% FK 1 0.07% CPI1 1 0.07% HYD1 1 0.07% MDS/IspF 1 0.07% HMGR 1 0.07% HDR/IspH 1 0.07% TPS 1 0.07% GPPS 1 0.07% IDI 1 0.07% DXS 1 0.07% CMK/IspE 1 0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 129 19 BAHD (62) View species results
Phenylpropanoid pathway 126 11 POD (56) View species results
Alkaloid pathway 112 19 NMT (27) View species results
Flavonoid pathway 64 9 UFGT (15) View species results
Rosmarinic acid pathway 60 7 C4H (16) View species results
Steroid pathway 37 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 478 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 115 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
SCpencontig_75370207630 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
SCpencontig_85620222160 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
SCpencontig_88120229460 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
SCpencontig_88160229710 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
SCpencontig_92750247470 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
SCpencontig_93220253760 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
SCpencontig_93310254590 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
SCpencontig_93640256680 Alkaloid NMT low borderline NMT__00021__sp_O64827_SUVR5_ARATH
SCpencontig_93720257100 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
SCpencontig_94380261540 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH