PlantSME Plant secondary metabolism enzyme database

Schistostega pennata (schistostega_pennata)

Imported from atlas release summary for Schistostega pennata.

528
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 24.43% Phenylpropanoid pathway 23.86% Alkaloid pathway 21.21% Flavonoid pathway 12.12% Rosmarinic acid pathway 11.36% Steroid pathway 7.01%
Family Distribution
BAHD 6.75% C3'H/CYP98A 5.72% 4CL 5.28% C4H 5.28% POD 4.84% NMT 4.4% CYP76 4.33% STR 3.01%
Other Families 60.38%
More Families (97)
T3O 36 2.64% PAL 36 2.64% IFS 35 2.57% IFR 33 2.42% F3H 31 2.27% F3'H/CYP75B 30 2.2% DWF4/CYP90B1 29 2.13% GS 27 1.98% BR6OX2/CYP85A2 25 1.83% CODM/T6ODM 22 1.61% UGT 22 1.61% PYKS 21 1.54% UFGT 21 1.54% 7DLGT 19 1.39% CHS 15 1.1% F3'5'H/CYP75A 15 1.1% HCT 14 1.03% CPR 14 1.03% SMT1/SMT2/SMT3 14 1.03% H6H 13 0.95% IO 13 0.95% CAD 13 0.95% CAS 12 0.88% SLS 10 0.73% G8O/G8H 10 0.73% CSE 10 0.73% CYP71 10 0.73% T16H 9 0.66% CCR 9 0.66% RAS 9 0.66% TRI/TRII 8 0.59% 7DLH 8 0.59% SQS/FDFT1 8 0.59% PMT 7 0.51% COR 7 0.51% 8HGO 7 0.51% CNMT 7 0.51% DFR 7 0.51% LAC 7 0.51% COMT 7 0.51% CYP90D1 7 0.51% FPPS 7 0.51% CYP80B1 6 0.44% 16OMT 6 0.44% TDC 6 0.44% BR6OX1/CYP85A1 6 0.44% AACT 6 0.44% GGPPS 6 0.44% NCS 5 0.37% SGD 5 0.37% ANR 5 0.37% F5H/CYP84A 5 0.37% TAT 5 0.37% CPD/CYP90A1 5 0.37% MCT/IspD 5 0.37% DXR 5 0.37% ADC 4 0.29% FNS 4 0.29% CHI 4 0.29% CYP51G1 4 0.29% MVD 4 0.29% MPO 3 0.22% LAMT 3 0.22% DWF5 3 0.22% ROT3/CYP90C1 3 0.22% DET2 3 0.22% SQE 3 0.22% HDS/IspG 3 0.22% MVK 3 0.22% CYP719 2 0.15% BBE 2 0.15% ISY 2 0.15% XMT_MXMT_DXMT 2 0.15% FLS 2 0.15% CCoAOMT 2 0.15% HPPR 2 0.15% DWF7 2 0.15% SMO1/SMO2 2 0.15% PMK 2 0.15% HMGS 2 0.15% CYP80F1 1 0.07% GES 1 0.07% 6OMT_4OMT_SOMT 1 0.07% TYDC_DDC 1 0.07% ANS/LDOX 1 0.07% DWF1 1 0.07% FK 1 0.07% CPI1 1 0.07% HYD1 1 0.07% MDS/IspF 1 0.07% HMGR 1 0.07% HDR/IspH 1 0.07% TPS 1 0.07% GPPS 1 0.07% IDI 1 0.07% DXS 1 0.07% CMK/IspE 1 0.07%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 129 19 BAHD (62) View species results
Phenylpropanoid pathway 126 11 POD (56) View species results
Alkaloid pathway 112 19 NMT (27) View species results
Flavonoid pathway 64 9 UFGT (15) View species results
Rosmarinic acid pathway 60 7 C4H (16) View species results
Steroid pathway 37 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 478 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 115 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
SCpencontig_31710067620 Rosmarinic Acid RAS low borderline
SCpencontig_36800084280 Rosmarinic Acid RAS medium pass
SCpencontig_38170099670 Rosmarinic Acid RAS low borderline
SCpencontig_38690102400 Rosmarinic Acid RAS low borderline
SCpencontig_50125140 Rosmarinic Acid RAS medium pass
SCpencontig_54080135590 Rosmarinic Acid RAS low borderline
SCpencontig_90960237860 Rosmarinic Acid RAS low borderline
SCpencontig_92540243130 Rosmarinic Acid RAS medium pass
SCpencontig_92640244880 Rosmarinic Acid RAS medium pass