PlantSME Plant secondary metabolism enzyme database

Scutellaria barbata (scutellaria_barbata)

Imported from atlas release summary for Scutellaria barbata.

1603
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 32.44% Alkaloid pathway 18.9% Phenylpropanoid pathway 17.9% Flavonoid pathway 13.23% Rosmarinic acid pathway 12.29% Steroid pathway 5.24%
Family Distribution
C4H 7.99% C3'H/CYP98A 7.5% BAHD 5.19% CYP76 5.12% IFS 5.0% T3O 4.51% UGT 4.34% 7DLGT 3.9%
Other Families 56.46%
More Families (96)
UFGT 164 3.83% 4CL 126 2.94% POD 114 2.66% DWF4/CYP90B1 112 2.62% F3'H/CYP75B 104 2.43% BR6OX2/CYP85A2 92 2.15% F3H 76 1.78% CYP71 73 1.71% NMT 66 1.54% STR 57 1.33% CAD 57 1.33% HCT 54 1.26% CYP90D1 51 1.19% CODM/T6ODM 50 1.17% TAT 45 1.05% G8O/G8H 43 1.0% SMT1/SMT2/SMT3 43 1.0% IO 41 0.96% COMT 41 0.96% CAS 39 0.91% TPS 39 0.91% GES 36 0.84% LAC 36 0.84% H6H 35 0.82% IFR 35 0.82% T16H 33 0.77% 16OMT 33 0.77% CYP51G1 33 0.77% BBE 32 0.75% TRI/TRII 32 0.75% GS 29 0.68% CSE 29 0.68% 7DLH 27 0.63% F5H/CYP84A 27 0.63% RAS 27 0.63% F3'5'H/CYP75A 26 0.61% CPD/CYP90A1 26 0.61% ANR 25 0.58% PMT 24 0.56% SGD 24 0.56% PYKS 22 0.51% SLS 21 0.49% FNS 19 0.44% BR6OX1/CYP85A1 19 0.44% CCR 16 0.37% PAL 15 0.35% GGPPS 14 0.33% CYP719 13 0.3% ROT3/CYP90C1 12 0.28% DXS 12 0.28% 8HGO 11 0.26% DFR 10 0.23% SQE 10 0.23% FPPS 10 0.23% AACT 10 0.23% LAMT 9 0.21% MPO 9 0.21% CCoAOMT 9 0.21% ANS/LDOX 8 0.19% COR 7 0.16% CNMT 7 0.16% NCS 7 0.16% CYP80B1 7 0.16% HPPR 7 0.16% MVK 6 0.14% ISY 5 0.12% CYP80F1 5 0.12% CPR 5 0.12% SQS/FDFT1 5 0.12% CHI 4 0.09% DET2 4 0.09% SMO1/SMO2 4 0.09% MCT/IspD 4 0.09% CHS 3 0.07% MVD 3 0.07% TYDC_DDC 2 0.05% CPI1 2 0.05% HDR/IspH 2 0.05% CMK/IspE 2 0.05% HMGS 2 0.05% MDS/IspF 2 0.05% DXR 2 0.05% HMGR 2 0.05% ADC 1 0.02% 6OMT_4OMT_SOMT 1 0.02% TDC 1 0.02% FLS 1 0.02% FK 1 0.02% DWF1 1 0.02% DWF7 1 0.02% HYD1 1 0.02% DWF5 1 0.02% IDI 1 0.02% HDS/IspG 1 0.02% PMK 1 0.02% GPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 520 21 UGT (178) View species results
Alkaloid pathway 303 21 7DLGT (85) View species results
Phenylpropanoid pathway 287 12 POD (108) View species results
Flavonoid pathway 212 11 UFGT (153) View species results
Rosmarinic acid pathway 197 7 C4H (100) View species results
Steroid pathway 84 12 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2054 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
scutellaria_barbata_GWHPAOTP000481 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP002779 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP002780 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP003623 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP008209 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP011922 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP011923 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP011924 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP012141 Alkaloid PYKS high pass
scutellaria_barbata_GWHPAOTP012733 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP012808 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP016531 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP019643 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP019644 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP022215 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP022435 Alkaloid PYKS high pass
scutellaria_barbata_GWHPAOTP023118 Alkaloid PYKS high pass
scutellaria_barbata_GWHPAOTP023189 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP024387 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP025801 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP030705 Alkaloid PYKS low borderline
scutellaria_barbata_GWHPAOTP031739 Alkaloid PYKS low borderline