PlantSME Plant secondary metabolism enzyme database

Selaginella moellendorffii (selaginella_moellendorffii)

Imported from atlas release summary for Selaginella moellendorffii.

1325
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Current group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Lycophytes/Ferns
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 26.79% Phenylpropanoid pathway 22.57% Alkaloid pathway 21.21% Flavonoid pathway 15.17% Rosmarinic acid pathway 10.49% Steroid pathway 3.77%
Family Distribution
C4H 7.78% C3'H/CYP98A 6.74% CYP76 5.24% 4CL 4.75% BAHD 4.52% UGT 4.49% 7DLGT 4.44% UFGT 4.12%
Other Families 57.91%
More Families (97)
POD 136 3.92% T3O 131 3.77% IFS 117 3.37% DWF4/CYP90B1 111 3.2% F3'H/CYP75B 105 3.03% NMT 74 2.13% BR6OX2/CYP85A2 73 2.1% STR 59 1.7% F3H 58 1.67% TPS 57 1.64% HCT 56 1.61% RAS 47 1.35% G8O/G8H 40 1.15% CSE 37 1.07% CODM/T6ODM 36 1.04% IO 34 0.98% SLS 34 0.98% F3'5'H/CYP75A 34 0.98% CAD 34 0.98% CYP90D1 33 0.95% IFR 31 0.89% GS 29 0.84% T16H 26 0.75% CAS 24 0.69% TRI/TRII 22 0.63% SGD 21 0.61% CCR 21 0.61% COMT 21 0.61% SMT1/SMT2/SMT3 20 0.58% H6H 19 0.55% 8HGO 19 0.55% FNS 19 0.55% LAC 19 0.55% BBE 18 0.52% NCS 18 0.52% ANR 18 0.52% F5H/CYP84A 17 0.49% TAT 17 0.49% 7DLH 16 0.46% DFR 16 0.46% FPPS 16 0.46% COR 15 0.43% PYKS 13 0.37% GES 12 0.35% CNMT 12 0.35% CPR 12 0.35% CYP71 12 0.35% CYP80B1 11 0.32% CPD/CYP90A1 11 0.32% ISY 9 0.26% LAMT 9 0.26% PMT 9 0.26% TYDC_DDC 8 0.23% AACT 8 0.23% CHS 7 0.2% ANS/LDOX 7 0.2% BR6OX1/CYP85A1 7 0.2% 16OMT 6 0.17% CHI 6 0.17% DET2 6 0.17% CYP51G1 6 0.17% CMK/IspE 6 0.17% GGPPS 6 0.17% MVD 5 0.14% ADC 4 0.12% 6OMT_4OMT_SOMT 4 0.12% CYP719 4 0.12% CCoAOMT 4 0.12% MVK 4 0.12% FLS 3 0.09% PAL 3 0.09% HPPR 3 0.09% DWF1 3 0.09% SMO1/SMO2 3 0.09% ROT3/CYP90C1 3 0.09% SQS/FDFT1 3 0.09% MCT/IspD 3 0.09% TDC 2 0.06% MPO 2 0.06% XMT_MXMT_DXMT 2 0.06% HYD1 2 0.06% CPI1 2 0.06% HDR/IspH 2 0.06% PMK 2 0.06% DXS 2 0.06% HMGR 2 0.06% HMGS 2 0.06% CYP80F1 1 0.03% ODC 1 0.03% DWF5 1 0.03% DWF7 1 0.03% FK 1 0.03% SQE 1 0.03% IDI 1 0.03% DXR 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 355 19 UGT (133) View species results
Phenylpropanoid pathway 299 11 POD (132) View species results
Alkaloid pathway 281 23 7DLGT (104) View species results
Flavonoid pathway 201 8 UFGT (134) View species results
Rosmarinic acid pathway 139 7 C4H (67) View species results
Steroid pathway 50 13 CAS (22) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 260 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status Best Target
Smoescaffold_120045200.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_120045370.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_1300053500.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_1300053540.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_130048780.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_1370054980.1 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_150061500.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_240101400.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_290110880.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_30115790.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_3320126770.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_40137990.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_420150170.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_530170650.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_610185750.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Smoescaffold_90218040.1 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO