PlantSME Plant secondary metabolism enzyme database

Solanum aethiopicum (solanum_aethiopicum)

Imported from atlas release summary for Solanum aethiopicum.

1394
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.42% Alkaloid pathway 23.46% Phenylpropanoid pathway 19.01% Flavonoid pathway 13.34% Rosmarinic acid pathway 9.25% Steroid pathway 4.52%
Family Distribution
C4H 6.29% C3'H/CYP98A 5.96% BAHD 5.82% UGT 4.68% 7DLGT 4.3% UFGT 3.91% 4CL 3.82% CYP76 3.63%
Other Families 61.59%
More Families (97)
IFS 129 3.58% POD 129 3.58% T3O 123 3.41% F3H 115 3.19% NMT 82 2.27% BR6OX2/CYP85A2 78 2.16% DWF4/CYP90B1 78 2.16% H6H 72 2.0% F3'H/CYP75B 68 1.88% STR 66 1.83% CODM/T6ODM 62 1.72% CAD 49 1.36% TPS 47 1.3% TRI/TRII 44 1.22% TAT 43 1.19% CYP71 43 1.19% GES 40 1.11% SMT1/SMT2/SMT3 39 1.08% T16H 33 0.91% CAS 31 0.86% SLS 30 0.83% CSE 30 0.83% LAC 29 0.8% IFR 27 0.75% F5H/CYP84A 27 0.75% HCT 27 0.75% GS 26 0.72% IO 26 0.72% FNS 26 0.72% COMT 26 0.72% F3'5'H/CYP75A 24 0.67% 7DLH 22 0.61% CPD/CYP90A1 22 0.61% PYKS 21 0.58% RAS 21 0.58% G8O/G8H 20 0.55% 16OMT 20 0.55% SGD 19 0.53% PMT 19 0.53% CYP90D1 19 0.53% BBE 18 0.5% PAL 18 0.5% CCR 18 0.5% BR6OX1/CYP85A1 17 0.47% LAMT 16 0.44% ROT3/CYP90C1 16 0.44% DFR 14 0.39% ANS/LDOX 14 0.39% ANR 14 0.39% NCS 12 0.33% COR 12 0.33% CYP51G1 12 0.33% AACT 12 0.33% CNMT 11 0.3% FPPS 11 0.3% MPO 9 0.25% GGPPS 9 0.25% 8HGO 8 0.22% SQS/FDFT1 8 0.22% CYP80B1 7 0.19% CHS 7 0.19% HPPR 7 0.19% CPR 7 0.19% DET2 7 0.19% TYDC_DDC 6 0.17% CYP719 6 0.17% ISY 6 0.17% CCoAOMT 6 0.17% MVD 6 0.17% CHI 5 0.14% SQE 4 0.11% DWF1 3 0.08% MVK 3 0.08% HMGR 3 0.08% HMGS 3 0.08% DXS 3 0.08% XMT_MXMT_DXMT 2 0.06% CYP80F1 2 0.06% ADC 2 0.06% ODC 2 0.06% FLS 2 0.06% DWF5 2 0.06% SMO1/SMO2 2 0.06% DWF7 2 0.06% HYD1 2 0.06% CMK/IspE 2 0.06% MDS/IspF 2 0.06% 6OMT_4OMT_SOMT 1 0.03% TDC 1 0.03% FK 1 0.03% CPI1 1 0.03% IDI 1 0.03% MCT/IspD 1 0.03% PMK 1 0.03% DXR 1 0.03% HDR/IspH 1 0.03% HDS/IspG 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 424 20 BAHD (149) View species results
Alkaloid pathway 327 24 7DLGT (70) View species results
Phenylpropanoid pathway 265 11 POD (122) View species results
Flavonoid pathway 186 10 UFGT (123) View species results
Rosmarinic acid pathway 129 7 C4H (47) View species results
Steroid pathway 63 12 CAS (22) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1375 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 258 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status Best Target
solanum_aethiopicum_Soaet10022706 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
solanum_aethiopicum_Soaet10025843 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
solanum_aethiopicum_Soaet10028288 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
solanum_aethiopicum_Soaet10030234 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
solanum_aethiopicum_Soaet10031658 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
solanum_aethiopicum_Soaet10031659 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
solanum_aethiopicum_Soaet10033360 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
solanum_aethiopicum_Soaet10033528 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
solanum_aethiopicum_Soaet10036545 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
solanum_aethiopicum_Soaet10036631 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
solanum_aethiopicum_Soaet10041769 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC