Solanum galapagense (solanum_galapagense)
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Imported from atlas release summary for Solanum galapagense.
1658
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1658
Candidate Genes
C4H
7.59%
C3'H/CYP98A
6.06%
BAHD
5.45%
UGT
4.36%
CYP76
4.06%
7DLGT
4.04%
4CL
3.78%
POD
3.76%
Other Families
60.9%
More Families (97)
UFGT
160
3.71%
T3O
151
3.5%
IFS
150
3.48%
F3'H/CYP75B
114
2.65%
F3H
112
2.6%
DWF4/CYP90B1
100
2.32%
BR6OX2/CYP85A2
96
2.23%
NMT
83
1.93%
CYP71
76
1.76%
STR
72
1.67%
CODM/T6ODM
65
1.51%
H6H
63
1.46%
SMT1/SMT2/SMT3
56
1.3%
CAD
50
1.16%
TAT
50
1.16%
TPS
50
1.16%
T16H
47
1.09%
PAL
45
1.04%
TRI/TRII
43
1.0%
G8O/G8H
43
1.0%
GES
41
0.95%
CAS
38
0.88%
LAC
37
0.86%
7DLH
36
0.84%
FNS
34
0.79%
CSE
34
0.79%
HCT
33
0.77%
IFR
32
0.74%
PYKS
30
0.7%
BBE
30
0.7%
SLS
29
0.67%
F5H/CYP84A
26
0.6%
F3'5'H/CYP75A
25
0.58%
GS
24
0.56%
COMT
23
0.53%
LAMT
22
0.51%
SGD
22
0.51%
IO
22
0.51%
ANR
22
0.51%
CYP90D1
22
0.51%
PMT
20
0.46%
CCR
20
0.46%
RAS
20
0.46%
CPD/CYP90A1
19
0.44%
TYDC_DDC
18
0.42%
ANS/LDOX
17
0.39%
16OMT
16
0.37%
BR6OX1/CYP85A1
16
0.37%
NCS
15
0.35%
CYP51G1
15
0.35%
8HGO
14
0.32%
MPO
12
0.28%
FPPS
12
0.28%
DFR
11
0.26%
CCoAOMT
11
0.26%
CNMT
10
0.23%
COR
10
0.23%
GGPPS
10
0.23%
SQS/FDFT1
9
0.21%
ROT3/CYP90C1
9
0.21%
CYP80B1
8
0.19%
CYP719
8
0.19%
CHS
8
0.19%
HPPR
7
0.16%
CPR
7
0.16%
6OMT_4OMT_SOMT
6
0.14%
DET2
6
0.14%
HMGR
6
0.14%
AACT
6
0.14%
TDC
5
0.12%
SMO1/SMO2
5
0.12%
MVD
5
0.12%
ISY
4
0.09%
CHI
4
0.09%
SQE
4
0.09%
PMK
4
0.09%
ADC
3
0.07%
ODC
3
0.07%
DWF7
3
0.07%
DXS
3
0.07%
HMGS
3
0.07%
CYP80F1
2
0.05%
FLS
2
0.05%
DWF5
2
0.05%
FK
2
0.05%
CPI1
2
0.05%
DWF1
2
0.05%
HYD1
2
0.05%
MVK
2
0.05%
IDI
2
0.05%
CMK/IspE
1
0.02%
MCT/IspD
1
0.02%
HDR/IspH
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
MDS/IspF
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 504 | 19 | BAHD (175) | View species results |
| Alkaloid pathway | 343 | 25 | 7DLGT (69) | View species results |
| Phenylpropanoid pathway | 333 | 12 | POD (156) | View species results |
| Flavonoid pathway | 222 | 11 | UFGT (141) | View species results |
| Rosmarinic acid pathway | 167 | 7 | C4H (68) | View species results |
| Steroid pathway | 89 | 12 | SMT1/SMT2/SMT3 (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1777 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 288 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| solanum_galapagense_GWHPBJTJ023129 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ024711 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ025164 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ025165 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ025344 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| solanum_galapagense_GWHPBJTJ025449 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ025628 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ027645 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ027872 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| solanum_galapagense_GWHPBJTJ027873 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| solanum_galapagense_GWHPBJTJ028058 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ028136 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ028363 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ028512 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ029769 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ029770 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ030036 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ030892 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ030992 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ033031 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ033032 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| solanum_galapagense_GWHPBJTJ033217 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |