Sonneratia alba (sonneratia_alba)
Imported from atlas release summary for Sonneratia alba.
1650
Candidate Protein Records
1203
Pathway-Level Records
3109
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3109
Family-Level Calls
BAHD
6.79%
C4H
6.14%
POD
4.92%
UGT
4.28%
C3'H/CYP98A
4.15%
4CL
3.96%
7DLGT
3.76%
CYP76
3.35%
Other Families
62.66%
More Families (98)
IFS
102
3.28%
UFGT
91
2.93%
F3H
79
2.54%
NMT
71
2.28%
CODM/T6ODM
66
2.12%
STR
63
2.03%
T3O
60
1.93%
CAD
53
1.7%
LAC
53
1.7%
DWF4/CYP90B1
53
1.7%
F3'H/CYP75B
51
1.64%
SMT1/SMT2/SMT3
49
1.58%
IFR
45
1.45%
G8O/G8H
42
1.35%
BR6OX2/CYP85A2
39
1.25%
HCT
38
1.22%
T16H
35
1.13%
FNS
35
1.13%
GS
34
1.09%
H6H
34
1.09%
SGD
33
1.06%
CSE
33
1.06%
CAS
33
1.06%
TPS
31
1.0%
TAT
30
0.96%
COMT
29
0.93%
CYP71
29
0.93%
GES
27
0.87%
RAS
26
0.84%
TRI/TRII
24
0.77%
ANR
24
0.77%
CCR
24
0.77%
16OMT
23
0.74%
7DLH
21
0.68%
IO
21
0.68%
PMT
21
0.68%
PAL
21
0.68%
8HGO
18
0.58%
PYKS
17
0.55%
ANS/LDOX
16
0.51%
F5H/CYP84A
16
0.51%
BR6OX1/CYP85A1
15
0.48%
SLS
14
0.45%
COR
14
0.45%
LAMT
14
0.45%
CHS
14
0.45%
NCS
13
0.42%
DFR
13
0.42%
F3'5'H/CYP75A
13
0.42%
ROT3/CYP90C1
13
0.42%
CYP90D1
11
0.35%
CPD/CYP90A1
11
0.35%
MPO
9
0.29%
CPR
9
0.29%
FPPS
9
0.29%
SMO1/SMO2
8
0.26%
SQE
8
0.26%
AACT
8
0.26%
MVD
8
0.26%
CNMT
7
0.23%
ADC
7
0.23%
HMGR
7
0.23%
MVK
7
0.23%
ISY
6
0.19%
CYP719
6
0.19%
CHI
6
0.19%
CCoAOMT
6
0.19%
HPPR
6
0.19%
SQS/FDFT1
6
0.19%
GGPPS
6
0.19%
CYP80B1
5
0.16%
DET2
4
0.13%
IDI
4
0.13%
TDC
3
0.1%
BBE
3
0.1%
6OMT_4OMT_SOMT
3
0.1%
TYDC_DDC
3
0.1%
CYP51G1
3
0.1%
DWF7
3
0.1%
HMGS
3
0.1%
DXS
3
0.1%
HDR/IspH
3
0.1%
CYP80F1
2
0.06%
FK
2
0.06%
DWF5
2
0.06%
MDS/IspF
2
0.06%
DXR
2
0.06%
MCT/IspD
2
0.06%
CMK/IspE
2
0.06%
GPPS
2
0.06%
ODC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
FLS
1
0.03%
CPI1
1
0.03%
HYD1
1
0.03%
DWF1
1
0.03%
HDS/IspG
1
0.03%
PMK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 355 | 19 | BAHD (145) | View species results |
| Phenylpropanoid pathway | 287 | 12 | POD (128) | View species results |
| Alkaloid pathway | 254 | 20 | 7DLGT (40) | View species results |
| Flavonoid pathway | 146 | 10 | UFGT (76) | View species results |
| Rosmarinic acid pathway | 82 | 7 | 4CL (25) | View species results |
| Steroid pathway | 79 | 11 | SMT1/SMT2/SMT3 (29) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 986 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 275 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| sonneratia_alba_SA_05626 | Terpenoid | GGPPS | medium | borderline |
| sonneratia_alba_SA_05627 | Terpenoid | GGPPS | medium | borderline |
| sonneratia_alba_SA_06786 | Terpenoid | GGPPS | medium | borderline |
| sonneratia_alba_SA_17874 | Terpenoid | GGPPS | low | borderline |
| sonneratia_alba_SA_27870 | Terpenoid | GGPPS | medium | borderline |
| sonneratia_alba_SA_18069 | Terpenoid | GPPS | medium | borderline |
| sonneratia_alba_SA_26095 | Terpenoid | GPPS | low | borderline |
| sonneratia_alba_SA_10605 | Terpenoid | HDR/IspH | medium | pass |
| sonneratia_alba_SA_11692 | Terpenoid | HDR/IspH | low | borderline |
| sonneratia_alba_SA_18766 | Terpenoid | HDR/IspH | low | borderline |
| sonneratia_alba_SA_19184 | Terpenoid | HDS/IspG | high | pass |
| sonneratia_alba_SA_00335 | Terpenoid | HMGR | medium | pass |
| sonneratia_alba_SA_06854 | Terpenoid | HMGR | medium | pass |
| sonneratia_alba_SA_08478 | Terpenoid | HMGR | medium | pass |
| sonneratia_alba_SA_09787 | Terpenoid | HMGR | low | borderline |
| sonneratia_alba_SA_13124 | Terpenoid | HMGR | medium | pass |
| sonneratia_alba_SA_13255 | Terpenoid | HMGR | low | borderline |
| sonneratia_alba_SA_26869 | Terpenoid | HMGR | medium | pass |
| sonneratia_alba_SA_04215 | Terpenoid | HMGS | high | pass |
| sonneratia_alba_SA_07224 | Terpenoid | HMGS | high | pass |
| sonneratia_alba_SA_24072 | Terpenoid | HMGS | high | pass |
| sonneratia_alba_SA_01908 | Terpenoid | IDI | low | borderline |
| sonneratia_alba_SA_04360 | Terpenoid | IDI | medium | pass |
| sonneratia_alba_SA_06695 | Terpenoid | IDI | medium | pass |
| sonneratia_alba_SA_24167 | Terpenoid | IDI | medium | pass |
| sonneratia_alba_SA_12999 | Terpenoid | MCT/IspD | high | pass |
| sonneratia_alba_SA_20010 | Terpenoid | MCT/IspD | low | borderline |
| sonneratia_alba_SA_04264 | Terpenoid | MDS/IspF | high | pass |
| sonneratia_alba_SA_07274 | Terpenoid | MDS/IspF | medium | pass |
| sonneratia_alba_SA_08243 | Terpenoid | MVD | low | borderline |
| sonneratia_alba_SA_14128 | Terpenoid | MVD | medium | pass |
| sonneratia_alba_SA_16141 | Terpenoid | MVD | low | borderline |
| sonneratia_alba_SA_17459 | Terpenoid | MVD | low | borderline |
| sonneratia_alba_SA_24313 | Terpenoid | MVD | low | borderline |
| sonneratia_alba_SA_24316 | Terpenoid | MVD | medium | pass |
| sonneratia_alba_SA_24816 | Terpenoid | MVD | medium | pass |
| sonneratia_alba_SA_24817 | Terpenoid | MVD | low | borderline |
| sonneratia_alba_SA_00342 | Terpenoid | MVK | low | borderline |
| sonneratia_alba_SA_11320 | Terpenoid | MVK | low | borderline |
| sonneratia_alba_SA_18678 | Terpenoid | MVK | low | borderline |
| sonneratia_alba_SA_23105 | Terpenoid | MVK | medium | pass |
| sonneratia_alba_SA_23252 | Terpenoid | MVK | medium | pass |
| sonneratia_alba_SA_23255 | Terpenoid | MVK | low | borderline |
| sonneratia_alba_SA_23256 | Terpenoid | MVK | low | borderline |
| sonneratia_alba_SA_26081 | Terpenoid | PMK | medium | pass |
| sonneratia_alba_SA_01365 | Terpenoid | TPS | medium | pass |
| sonneratia_alba_SA_01366 | Terpenoid | TPS | medium | pass |
| sonneratia_alba_SA_01546 | Terpenoid | TPS | medium | pass |
| sonneratia_alba_SA_02023 | Terpenoid | TPS | medium | pass |
| sonneratia_alba_SA_03352 | Terpenoid | TPS | medium | pass |