PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sbic10G0002990.2 Alkaloid H6H low borderline
Sbic10G0006110.1 Alkaloid H6H low borderline
Sbic10G0006180.1 Alkaloid H6H medium borderline
Sbic10G0011170.1 Alkaloid H6H low borderline
Sbic10G0025250.1 Alkaloid H6H low borderline
Sbic10G0025250.2 Alkaloid H6H low borderline
Sbic10G0025250.3 Alkaloid H6H low borderline
Sbic01G0001210.1 Alkaloid IO medium pass
Sbic01G0002280.1 Alkaloid IO medium borderline
Sbic01G0019460.1 Alkaloid IO medium pass
Sbic01G0019470.1 Alkaloid IO medium pass
Sbic01G0019480.1 Alkaloid IO medium pass
Sbic01G0033700.1 Alkaloid IO low borderline
Sbic01G0054130.1 Alkaloid IO medium borderline
Sbic02G0004140.1 Alkaloid IO medium borderline
Sbic02G0012880.1 Alkaloid IO medium borderline
Sbic02G0027940.1 Alkaloid IO medium borderline
Sbic03G0001040.1 Alkaloid IO medium borderline
Sbic03G0001040.2 Alkaloid IO medium borderline
Sbic03G0028340.1 Alkaloid IO medium borderline
Sbic04G0011250.1 Alkaloid IO medium borderline
Sbic05G0009090.1 Alkaloid IO medium borderline
Sbic05G0016790.1 Alkaloid IO medium pass
Sbic05G0022190.1 Alkaloid IO medium pass
Sbic05G0022190.2 Alkaloid IO medium pass
Sbic05G0022560.1 Alkaloid IO medium borderline
Sbic06G0007010.1 Alkaloid IO medium borderline
Sbic06G0019180.2 Alkaloid IO low borderline
Sbic07G0000320.1 Alkaloid IO medium borderline
Sbic07G0003080.1 Alkaloid IO medium borderline
Sbic07G0018830.1 Alkaloid IO medium borderline
Sbic08G0015170.1 Alkaloid IO medium borderline
Sbic09G0000070.1 Alkaloid IO low borderline
Sbic09G0004850.1 Alkaloid IO medium borderline
Sbic10G0018160.1 Alkaloid IO medium pass
Sbic10G0018230.2 Alkaloid IO low borderline
Sbicsuper_29670000570.1 Alkaloid IO medium borderline
Sbic01G0034740.1 Alkaloid ISY medium pass
Sbic01G0034750.1 Alkaloid ISY medium pass
Sbic01G0034750.2 Alkaloid ISY medium pass
Sbic05G0008730.1 Alkaloid ISY medium pass
Sbic02G0004610.1 Alkaloid LAMT medium borderline
Sbic02G0005980.1 Alkaloid LAMT medium borderline
Sbic02G0031000.1 Alkaloid LAMT medium borderline
Sbic02G0031000.2 Alkaloid LAMT medium borderline
Sbic02G0031000.3 Alkaloid LAMT medium borderline
Sbic02G0031000.4 Alkaloid LAMT medium borderline
Sbic03G0028360.1 Alkaloid LAMT medium borderline
Sbic03G0041840.1 Alkaloid LAMT low borderline
Sbic07G0014770.1 Alkaloid LAMT low borderline