PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sbic07G0023020.1 Alkaloid LAMT medium borderline
Sbic08G0001660.1 Alkaloid LAMT low borderline
Sbic10G0010400.1 Alkaloid LAMT medium borderline
Sbic10G0010400.2 Alkaloid LAMT medium pass
Sbic10G0010430.1 Alkaloid LAMT medium borderline
Sbic10G0010430.2 Alkaloid LAMT medium borderline
Sbic10G0010430.3 Alkaloid LAMT medium borderline
Sbic10G0010430.4 Alkaloid LAMT medium borderline
Sbic02G0009700.1 Alkaloid MPO high pass
Sbic02G0009700.2 Alkaloid MPO high pass
Sbic02G0009700.3 Alkaloid MPO high pass
Sbic02G0009700.4 Alkaloid MPO low borderline
Sbic02G0009700.5 Alkaloid MPO medium pass
Sbic02G0028980.1 Alkaloid MPO high pass
Sbic02G0028980.2 Alkaloid MPO high pass
Sbic02G0028980.3 Alkaloid MPO high pass
Sbic02G0028980.4 Alkaloid MPO high pass
Sbic02G0028980.5 Alkaloid MPO high pass
Sbic02G0028980.6 Alkaloid MPO high pass
Sbic02G0035530.1 Alkaloid MPO high pass
Sbic04G0025390.1 Alkaloid MPO high pass
Sbic06G0003630.1 Alkaloid MPO medium pass
Sbic06G0012390.1 Alkaloid MPO high pass
Sbic01G0000530.1 Alkaloid NCS medium borderline
Sbic01G0031430.1 Alkaloid NCS medium borderline
Sbic01G0031430.2 Alkaloid NCS medium borderline
Sbic01G0034130.1 Alkaloid NCS medium borderline
Sbic01G0035730.1 Alkaloid NCS medium borderline
Sbic01G0035730.2 Alkaloid NCS medium borderline
Sbic01G0038380.1 Alkaloid NCS medium borderline
Sbic01G0038380.2 Alkaloid NCS medium borderline
Sbic01G0038380.3 Alkaloid NCS medium borderline
Sbic01G0038380.4 Alkaloid NCS medium borderline
Sbic01G0038380.5 Alkaloid NCS medium borderline
Sbic01G0038380.6 Alkaloid NCS medium borderline
Sbic02G0008960.1 Alkaloid NCS medium borderline
Sbic02G0008960.2 Alkaloid NCS medium borderline
Sbic03G0003800.1 Alkaloid NCS medium borderline
Sbic03G0003800.2 Alkaloid NCS medium borderline
Sbic03G0014930.1 Alkaloid NCS medium borderline
Sbic03G0014950.1 Alkaloid NCS medium borderline
Sbic03G0014950.2 Alkaloid NCS medium borderline
Sbic03G0014960.1 Alkaloid NCS medium borderline
Sbic03G0016110.1 Alkaloid NCS medium borderline
Sbic03G0040370.1 Alkaloid NCS medium pass
Sbic04G0015520.1 Alkaloid NCS medium borderline
Sbic04G0033330.1 Alkaloid NCS medium pass
Sbic04G0033340.1 Alkaloid NCS medium pass
Sbic05G0006720.1 Alkaloid NCS medium borderline
Sbic05G0006720.2 Alkaloid NCS medium borderline