PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sbic05G0017200.3 Alkaloid T16H medium borderline
Sbic05G0017930.1 Alkaloid T16H medium borderline
Sbic06G0002380.1 Alkaloid T16H medium borderline
Sbic06G0012610.1 Alkaloid T16H medium borderline
Sbic06G0012640.1 Alkaloid T16H medium borderline
Sbic06G0012670.1 Alkaloid T16H medium borderline
Sbic06G0023310.1 Alkaloid T16H medium borderline
Sbic07G0000370.3 Alkaloid T16H medium borderline
Sbic07G0009840.1 Alkaloid T16H medium borderline
Sbic07G0013990.1 Alkaloid T16H medium pass
Sbic07G0016070.1 Alkaloid T16H medium borderline
Sbic08G0002640.1 Alkaloid T16H medium borderline
Sbic08G0004040.1 Alkaloid T16H medium borderline
Sbic08G0016140.1 Alkaloid T16H medium borderline
Sbic10G0020240.1 Alkaloid T16H medium borderline
Sbic10G0021520.1 Alkaloid T16H medium borderline
Sbic10G0024320.1 Alkaloid T16H medium borderline
Sbic01G0001180.1 Alkaloid T3O medium borderline
Sbic01G0001200.1 Alkaloid T3O medium borderline
Sbic01G0001830.1 Alkaloid T3O medium borderline
Sbic01G0001880.1 Alkaloid T3O medium borderline
Sbic01G0004490.1 Alkaloid T3O medium borderline
Sbic01G0008370.1 Alkaloid T3O medium borderline
Sbic01G0008370.2 Alkaloid T3O medium borderline
Sbic01G0008380.1 Alkaloid T3O medium borderline
Sbic01G0008390.1 Alkaloid T3O medium borderline
Sbic01G0008390.2 Alkaloid T3O medium borderline
Sbic01G0013350.1 Alkaloid T3O medium borderline
Sbic01G0015320.1 Alkaloid T3O medium pass
Sbic01G0015330.1 Alkaloid T3O medium pass
Sbic01G0015330.2 Alkaloid T3O medium pass
Sbic01G0015350.1 Alkaloid T3O medium pass
Sbic01G0015350.2 Alkaloid T3O medium pass
Sbic01G0017870.1 Alkaloid T3O medium pass
Sbic01G0017920.1 Alkaloid T3O medium borderline
Sbic01G0018240.1 Alkaloid T3O medium borderline
Sbic01G0018250.1 Alkaloid T3O medium borderline
Sbic01G0018260.1 Alkaloid T3O medium borderline
Sbic01G0018280.1 Alkaloid T3O medium borderline
Sbic01G0018290.1 Alkaloid T3O medium borderline
Sbic01G0018310.1 Alkaloid T3O medium borderline
Sbic01G0019910.1 Alkaloid T3O medium borderline
Sbic01G0019920.1 Alkaloid T3O medium borderline
Sbic01G0020360.1 Alkaloid T3O medium borderline
Sbic01G0022230.1 Alkaloid T3O low borderline
Sbic01G0023820.1 Alkaloid T3O medium borderline
Sbic01G0024420.1 Alkaloid T3O medium borderline
Sbic01G0033700.2 Alkaloid T3O medium pass
Sbic01G0033710.1 Alkaloid T3O medium pass
Sbic01G0033710.2 Alkaloid T3O medium pass