PlantSME Plant secondary metabolism enzyme database

Sorghum bicolor (sorghum_bicolor)

Imported from atlas release summary for Sorghum bicolor.

2872
Candidate Protein Records
2546
Pathway-Level Records
6189
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 647 19 BAHD (232) View species results
Alkaloid pathway 626 25 7DLGT (108) View species results
Phenylpropanoid pathway 495 11 POD (236) View species results
Flavonoid pathway 346 11 UFGT (219) View species results
Rosmarinic acid pathway 230 7 C4H (106) View species results
Steroid pathway 202 11 CAS (99) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2346 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 439 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sbic01G0033710.3 Alkaloid T3O medium pass
Sbic01G0034350.1 Alkaloid T3O medium borderline
Sbic01G0035330.1 Alkaloid T3O medium borderline
Sbic01G0035580.1 Alkaloid T3O medium borderline
Sbic01G0036720.1 Alkaloid T3O medium borderline
Sbic01G0038070.1 Alkaloid T3O medium borderline
Sbic01G0038150.1 Alkaloid T3O medium borderline
Sbic01G0038180.1 Alkaloid T3O medium borderline
Sbic01G0038200.1 Alkaloid T3O medium borderline
Sbic01G0038420.1 Alkaloid T3O medium borderline
Sbic01G0038670.2 Alkaloid T3O medium borderline
Sbic01G0038690.1 Alkaloid T3O medium borderline
Sbic01G0038690.2 Alkaloid T3O medium borderline
Sbic01G0040200.1 Alkaloid T3O medium pass
Sbic01G0040200.2 Alkaloid T3O medium pass
Sbic01G0044390.1 Alkaloid T3O medium pass
Sbic01G0046770.1 Alkaloid T3O medium pass
Sbic01G0047380.1 Alkaloid T3O low borderline
Sbic01G0051550.1 Alkaloid T3O low borderline
Sbic01G0053640.1 Alkaloid T3O low borderline
Sbic01G0053670.1 Alkaloid T3O low borderline
Sbic01G0053680.1 Alkaloid T3O low borderline
Sbic02G0000040.1 Alkaloid T3O medium borderline
Sbic02G0003050.1 Alkaloid T3O medium borderline
Sbic02G0004150.1 Alkaloid T3O medium borderline
Sbic02G0004550.1 Alkaloid T3O medium borderline
Sbic02G0006760.1 Alkaloid T3O medium borderline
Sbic02G0006770.1 Alkaloid T3O medium borderline
Sbic02G0009140.1 Alkaloid T3O medium borderline
Sbic02G0009240.1 Alkaloid T3O medium borderline
Sbic02G0009290.1 Alkaloid T3O medium borderline
Sbic02G0009560.1 Alkaloid T3O medium pass
Sbic02G0010430.1 Alkaloid T3O medium pass
Sbic02G0011170.1 Alkaloid T3O medium borderline
Sbic02G0011180.1 Alkaloid T3O medium borderline
Sbic02G0018120.1 Alkaloid T3O medium borderline
Sbic02G0019460.1 Alkaloid T3O medium borderline
Sbic02G0022050.1 Alkaloid T3O medium borderline
Sbic02G0022060.1 Alkaloid T3O medium borderline
Sbic02G0022090.1 Alkaloid T3O medium borderline
Sbic02G0022100.1 Alkaloid T3O medium borderline
Sbic02G0022560.1 Alkaloid T3O medium borderline
Sbic02G0023080.1 Alkaloid T3O medium pass
Sbic02G0028030.1 Alkaloid T3O medium borderline
Sbic02G0028050.1 Alkaloid T3O medium borderline
Sbic02G0032810.1 Alkaloid T3O medium pass
Sbic02G0035020.1 Alkaloid T3O medium pass
Sbic03G0001020.1 Alkaloid T3O medium borderline
Sbic03G0001050.1 Alkaloid T3O medium borderline
Sbic03G0001070.1 Alkaloid T3O low borderline