PlantSME Plant secondary metabolism enzyme database

Spatholobus suberectus (spatholobus_suberectus)

Imported from atlas release summary for Spatholobus suberectus.

1655
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.85% Alkaloid pathway 21.51% Phenylpropanoid pathway 21.09% Flavonoid pathway 13.11% Rosmarinic acid pathway 9.06% Steroid pathway 5.38%
Family Distribution
BAHD 6.01% UGT 5.69% C4H 5.4% C3'H/CYP98A 5.11% 7DLGT 4.42% POD 4.4% UFGT 3.94% 4CL 3.81%
Other Families 61.21%
More Families (97)
CYP76 131 3.47% IFS 130 3.44% T3O 124 3.28% F3H 113 2.99% NMT 90 2.38% CODM/T6ODM 75 1.99% DWF4/CYP90B1 75 1.99% H6H 68 1.8% F3'H/CYP75B 61 1.62% SMT1/SMT2/SMT3 60 1.59% STR 59 1.56% CYP71 52 1.38% LAC 50 1.32% BR6OX2/CYP85A2 49 1.3% CSE 46 1.22% TRI/TRII 45 1.19% IFR 45 1.19% CAD 44 1.16% COMT 39 1.03% CAS 39 1.03% CYP90D1 35 0.93% T16H 33 0.87% HCT 32 0.85% RAS 30 0.79% TPS 30 0.79% SGD 28 0.74% PYKS 28 0.74% GES 28 0.74% IO 25 0.66% ANR 24 0.64% GS 23 0.61% G8O/G8H 23 0.61% ANS/LDOX 23 0.61% FNS 23 0.61% PMT 22 0.58% 16OMT 21 0.56% F5H/CYP84A 21 0.56% CCR 20 0.53% 8HGO 19 0.5% COR 18 0.48% BR6OX1/CYP85A1 18 0.48% SLS 17 0.45% TAT 17 0.45% BBE 16 0.42% F3'5'H/CYP75A 16 0.42% PAL 15 0.4% HPPR 15 0.4% ROT3/CYP90C1 15 0.4% CPD/CYP90A1 15 0.4% NCS 14 0.37% 7DLH 14 0.37% CNMT 14 0.37% CYP51G1 14 0.37% LAMT 12 0.32% MPO 12 0.32% CCoAOMT 11 0.29% DXS 10 0.26% DFR 9 0.24% CPR 9 0.24% GGPPS 9 0.24% AACT 9 0.24% ISY 8 0.21% CHS 8 0.21% CYP80B1 7 0.19% CHI 7 0.19% SQS/FDFT1 7 0.19% TDC 6 0.16% ADC 6 0.16% SMO1/SMO2 6 0.16% MVD 6 0.16% FPPS 6 0.16% 6OMT_4OMT_SOMT 5 0.13% DET2 5 0.13% SQE 5 0.13% HMGS 5 0.13% HMGR 5 0.13% MVK 5 0.13% TYDC_DDC 4 0.11% FLS 4 0.11% MCT/IspD 3 0.08% HYD1 2 0.05% DWF1 2 0.05% CPI1 2 0.05% DXR 2 0.05% PMK 2 0.05% CYP719 1 0.03% XMT_MXMT_DXMT 1 0.03% CYP80F1 1 0.03% ODC 1 0.03% DWF7 1 0.03% FK 1 0.03% DWF5 1 0.03% CMK/IspE 1 0.03% HDS/IspG 1 0.03% IDI 1 0.03% HDR/IspH 1 0.03% MDS/IspF 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 494 19 UGT (205) View species results
Alkaloid pathway 356 26 7DLGT (83) View species results
Phenylpropanoid pathway 349 12 POD (155) View species results
Flavonoid pathway 217 12 UFGT (136) View species results
Rosmarinic acid pathway 150 7 C4H (68) View species results
Steroid pathway 89 14 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1274 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 289 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHI
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Gene Pathway Family Confidence Status Best Target
TKY50619.1 Flavonoid CHI medium pass CHI__00012__sp_Q8H0G1_CFI2_LOTJA
TKY50620.1 Flavonoid CHI medium pass CHI__00009__sp_Q53B70_CF1B2_SOYBN
TKY50621.1 Flavonoid CHI medium pass CHI__00008__sp_Q43056_CFI_PUEML
TKY50622.1 Flavonoid CHI medium pass CHI__00008__sp_Q43056_CFI_PUEML
TKY50623.1 Flavonoid CHI medium pass CHI__00008__sp_Q43056_CFI_PUEML
TKY57997.1 Flavonoid CHI low borderline CHI__00002__sp_A0A2U7XUH7_CHIL1_HUMLU
TKY73945.1 Flavonoid CHI medium pass CHI__00001__sp_A0A2U7XUE3_CHIL2_HUMLU