PlantSME Plant secondary metabolism enzyme database

Stellera chamaejasme (stellera_chamaejasme)

Imported from atlas release summary for Stellera chamaejasme.

1238
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.37% Alkaloid pathway 21.73% Phenylpropanoid pathway 19.31% Flavonoid pathway 13.49% Rosmarinic acid pathway 9.77% Steroid pathway 5.33%
Family Distribution
C4H 7.75% C3'H/CYP98A 6.38% BAHD 5.14% UGT 4.42% IFS 4.31% T3O 4.01% 7DLGT 3.92% CYP76 3.83%
Other Families 60.24%
More Families (95)
UFGT 123 3.65% 4CL 120 3.56% DWF4/CYP90B1 98 2.91% POD 95 2.82% CYP71 83 2.46% F3H 72 2.14% F3'H/CYP75B 72 2.14% BR6OX2/CYP85A2 65 1.93% BBE 56 1.66% NMT 53 1.57% CAD 52 1.54% STR 45 1.34% SMT1/SMT2/SMT3 41 1.22% T16H 40 1.19% CSE 40 1.19% H6H 36 1.07% LAC 36 1.07% GS 35 1.04% CODM/T6ODM 34 1.01% CAS 32 0.95% TRI/TRII 30 0.89% IFR 30 0.89% TPS 29 0.86% SGD 28 0.83% CYP90D1 28 0.83% FNS 27 0.8% GES 26 0.77% PMT 25 0.74% SLS 25 0.74% F5H/CYP84A 25 0.74% IO 24 0.71% G8O/G8H 23 0.68% PYKS 23 0.68% TAT 23 0.68% CYP51G1 23 0.68% COMT 21 0.62% HCT 19 0.56% CCR 18 0.53% 16OMT 17 0.5% LAMT 16 0.48% RAS 16 0.48% 7DLH 14 0.42% NCS 14 0.42% ANR 14 0.42% F3'5'H/CYP75A 14 0.42% CPD/CYP90A1 14 0.42% COR 13 0.39% DFR 13 0.39% TYDC_DDC 11 0.33% HMGR 11 0.33% CNMT 10 0.3% FPPS 10 0.3% ISY 9 0.27% CHS 9 0.27% BR6OX1/CYP85A1 9 0.27% 8HGO 8 0.24% CCoAOMT 8 0.24% SQS/FDFT1 8 0.24% CYP80B1 7 0.21% DET2 7 0.21% ROT3/CYP90C1 7 0.21% MPO 6 0.18% CPR 6 0.18% HPPR 6 0.18% SQE 6 0.18% AACT 6 0.18% DXS 5 0.15% CYP719 4 0.12% CHI 4 0.12% MVK 4 0.12% GGPPS 4 0.12% ADC 3 0.09% XMT_MXMT_DXMT 3 0.09% ANS/LDOX 3 0.09% PAL 3 0.09% PMK 3 0.09% MDS/IspF 3 0.09% TDC 2 0.06% DWF1 2 0.06% SMO1/SMO2 2 0.06% MCT/IspD 2 0.06% HDR/IspH 2 0.06% MVD 2 0.06% HDS/IspG 2 0.06% DXR 2 0.06% CYP80F1 1 0.03% FLS 1 0.03% DWF7 1 0.03% CPI1 1 0.03% HYD1 1 0.03% FK 1 0.03% DWF5 1 0.03% IDI 1 0.03% CMK/IspE 1 0.03% HMGS 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 376 19 UGT (130) View species results
Alkaloid pathway 269 21 7DLGT (57) View species results
Phenylpropanoid pathway 239 13 POD (91) View species results
Flavonoid pathway 167 12 UFGT (112) View species results
Rosmarinic acid pathway 121 7 C4H (60) View species results
Steroid pathway 66 14 CAS (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1461 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 208 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status
stellera_chamaejasme_SchT004177.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT005634.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT008546.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT008556.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT008561.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT008562.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT013759.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT018710.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT018713.1 Alkaloid TYDC_DDC medium borderline
stellera_chamaejasme_SchT019043.1 Alkaloid TYDC_DDC low borderline
stellera_chamaejasme_SchT029237.1 Alkaloid TYDC_DDC medium borderline