PlantSME Plant secondary metabolism enzyme database

Streptocarpus rexii (streptocarpus_rexii)

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Imported from atlas release summary for Streptocarpus rexii.

1451
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.5% Phenylpropanoid pathway 22.61% Alkaloid pathway 19.5% Flavonoid pathway 13.51% Rosmarinic acid pathway 9.03% Steroid pathway 5.86%
Family Distribution
BAHD 6.61% C4H 6.09% 4CL 5.04% C3'H/CYP98A 4.96% UGT 4.27% POD 4.19% IFS 3.72% 7DLGT 3.55%
Other Families 61.56%
More Families (96)
UFGT 126 3.47% NMT 117 3.22% T3O 110 3.03% CYP76 108 2.98% F3H 85 2.34% STR 81 2.23% DWF4/CYP90B1 78 2.15% F3'H/CYP75B 59 1.63% CODM/T6ODM 54 1.49% CAD 51 1.41% BR6OX2/CYP85A2 48 1.32% H6H 46 1.27% LAC 44 1.21% HCT 43 1.18% G8O/G8H 42 1.16% CSE 41 1.13% IFR 40 1.1% SMT1/SMT2/SMT3 39 1.07% CYP71 36 0.99% RAS 35 0.96% 7DLH 33 0.91% T16H 33 0.91% PYKS 32 0.88% CPD/CYP90A1 32 0.88% TRI/TRII 30 0.83% PAL 30 0.83% PMT 29 0.8% GS 29 0.8% CAS 29 0.8% CYP90D1 28 0.77% F3'5'H/CYP75A 26 0.72% SLS 25 0.69% F5H/CYP84A 24 0.66% BBE 22 0.61% FNS 22 0.61% TPS 22 0.61% SGD 21 0.58% IO 21 0.58% GES 21 0.58% ANS/LDOX 20 0.55% COMT 20 0.55% TAT 20 0.55% LAMT 17 0.47% ANR 17 0.47% CCR 17 0.47% BR6OX1/CYP85A1 16 0.44% DFR 15 0.41% CPR 15 0.41% NCS 14 0.39% ROT3/CYP90C1 14 0.39% CYP51G1 14 0.39% COR 13 0.36% FPPS 13 0.36% 8HGO 11 0.3% GGPPS 11 0.3% AACT 11 0.3% DXS 11 0.3% 16OMT 9 0.25% CCoAOMT 9 0.25% SQE 9 0.25% ISY 8 0.22% HMGR 8 0.22% TYDC_DDC 7 0.19% CNMT 7 0.19% HYD1 7 0.19% MPO 6 0.17% HPPR 6 0.17% MVK 6 0.17% MVD 6 0.17% HDS/IspG 6 0.17% CHS 5 0.14% SQS/FDFT1 5 0.14% DET2 5 0.14% SMO1/SMO2 5 0.14% 6OMT_4OMT_SOMT 4 0.11% ADC 4 0.11% CYP719 4 0.11% CYP80B1 4 0.11% CHI 4 0.11% DWF5 3 0.08% DWF1 3 0.08% MCT/IspD 3 0.08% PMK 3 0.08% IDI 3 0.08% CMK/IspE 3 0.08% DXR 3 0.08% TDC 2 0.06% FLS 2 0.06% CPI1 2 0.06% DWF7 2 0.06% HDR/IspH 2 0.06% HMGS 2 0.06% GPPS 2 0.06% MDS/IspF 2 0.06% CYP80F1 1 0.03% FK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 428 19 BAHD (182) View species results
Phenylpropanoid pathway 328 12 POD (139) View species results
Alkaloid pathway 283 22 NMT (68) View species results
Flavonoid pathway 196 11 UFGT (108) View species results
Rosmarinic acid pathway 131 7 4CL (44) View species results
Steroid pathway 85 16 SMT1/SMT2/SMT3 (24) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1292 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 318 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP80F1
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Gene Pathway Family Confidence Status Best Target
streptocarpus_rexii_Sr35029-RA Alkaloid CYP80F1 medium borderline CYP80F1__00001__tr_A0A024CI64_A0A024CI64_ATRBE