Streptocarpus rexii (streptocarpus_rexii)
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Imported from atlas release summary for Streptocarpus rexii.
1451
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1451
Candidate Genes
BAHD
6.61%
C4H
6.09%
4CL
5.04%
C3'H/CYP98A
4.96%
UGT
4.27%
POD
4.19%
IFS
3.72%
7DLGT
3.55%
Other Families
61.56%
More Families (96)
UFGT
126
3.47%
NMT
117
3.22%
T3O
110
3.03%
CYP76
108
2.98%
F3H
85
2.34%
STR
81
2.23%
DWF4/CYP90B1
78
2.15%
F3'H/CYP75B
59
1.63%
CODM/T6ODM
54
1.49%
CAD
51
1.41%
BR6OX2/CYP85A2
48
1.32%
H6H
46
1.27%
LAC
44
1.21%
HCT
43
1.18%
G8O/G8H
42
1.16%
CSE
41
1.13%
IFR
40
1.1%
SMT1/SMT2/SMT3
39
1.07%
CYP71
36
0.99%
RAS
35
0.96%
7DLH
33
0.91%
T16H
33
0.91%
PYKS
32
0.88%
CPD/CYP90A1
32
0.88%
TRI/TRII
30
0.83%
PAL
30
0.83%
PMT
29
0.8%
GS
29
0.8%
CAS
29
0.8%
CYP90D1
28
0.77%
F3'5'H/CYP75A
26
0.72%
SLS
25
0.69%
F5H/CYP84A
24
0.66%
BBE
22
0.61%
FNS
22
0.61%
TPS
22
0.61%
SGD
21
0.58%
IO
21
0.58%
GES
21
0.58%
ANS/LDOX
20
0.55%
COMT
20
0.55%
TAT
20
0.55%
LAMT
17
0.47%
ANR
17
0.47%
CCR
17
0.47%
BR6OX1/CYP85A1
16
0.44%
DFR
15
0.41%
CPR
15
0.41%
NCS
14
0.39%
ROT3/CYP90C1
14
0.39%
CYP51G1
14
0.39%
COR
13
0.36%
FPPS
13
0.36%
8HGO
11
0.3%
GGPPS
11
0.3%
AACT
11
0.3%
DXS
11
0.3%
16OMT
9
0.25%
CCoAOMT
9
0.25%
SQE
9
0.25%
ISY
8
0.22%
HMGR
8
0.22%
TYDC_DDC
7
0.19%
CNMT
7
0.19%
HYD1
7
0.19%
MPO
6
0.17%
HPPR
6
0.17%
MVK
6
0.17%
MVD
6
0.17%
HDS/IspG
6
0.17%
CHS
5
0.14%
SQS/FDFT1
5
0.14%
DET2
5
0.14%
SMO1/SMO2
5
0.14%
6OMT_4OMT_SOMT
4
0.11%
ADC
4
0.11%
CYP719
4
0.11%
CYP80B1
4
0.11%
CHI
4
0.11%
DWF5
3
0.08%
DWF1
3
0.08%
MCT/IspD
3
0.08%
PMK
3
0.08%
IDI
3
0.08%
CMK/IspE
3
0.08%
DXR
3
0.08%
TDC
2
0.06%
FLS
2
0.06%
CPI1
2
0.06%
DWF7
2
0.06%
HDR/IspH
2
0.06%
HMGS
2
0.06%
GPPS
2
0.06%
MDS/IspF
2
0.06%
CYP80F1
1
0.03%
FK
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 428 | 19 | BAHD (182) | View species results |
| Phenylpropanoid pathway | 328 | 12 | POD (139) | View species results |
| Alkaloid pathway | 283 | 22 | NMT (68) | View species results |
| Flavonoid pathway | 196 | 11 | UFGT (108) | View species results |
| Rosmarinic acid pathway | 131 | 7 | 4CL (44) | View species results |
| Steroid pathway | 85 | 16 | SMT1/SMT2/SMT3 (24) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1292 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 318 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| streptocarpus_rexii_Sr36505-RA | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| streptocarpus_rexii_Sr36940-RA | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| streptocarpus_rexii_Sr37677-RA | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| streptocarpus_rexii_Sr37678-RA | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| streptocarpus_rexii_Sr37927-RA | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| streptocarpus_rexii_Sr37928-RA | Alkaloid | NMT | medium | pass | NMT__00034__sp_Q5VN06_CLF_ORYSJ |
| streptocarpus_rexii_Sr37929-RA | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| streptocarpus_rexii_Sr39382-RA | Alkaloid | NMT | medium | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| streptocarpus_rexii_Sr40514-RA | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| streptocarpus_rexii_Sr41956-RA | Alkaloid | NMT | medium | borderline | NMT__00052__sp_Q9AVJ9_MXMT1_COFAR |
| streptocarpus_rexii_Sr42017-RA | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| streptocarpus_rexii_Sr42188-RA | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| streptocarpus_rexii_Sr42258-RA | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| streptocarpus_rexii_Sr42582-RA | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| streptocarpus_rexii_Sr43680-RA | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| streptocarpus_rexii_Sr44019-RA | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| streptocarpus_rexii_Sr44800-RA | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |