Striga hermonthica (striga_hermonthica)
/
Imported from atlas release summary for Striga hermonthica.
1214
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1214
Candidate Genes
C4H
6.19%
BAHD
5.99%
C3'H/CYP98A
5.44%
POD
4.34%
UGT
4.27%
CYP76
4.09%
4CL
3.82%
7DLGT
3.79%
Other Families
62.08%
More Families (95)
UFGT
109
3.75%
T3O
94
3.23%
IFS
92
3.17%
NMT
71
2.44%
DWF4/CYP90B1
69
2.37%
F3'H/CYP75B
66
2.27%
F3H
65
2.24%
CAD
61
2.1%
STR
55
1.89%
SMT1/SMT2/SMT3
54
1.86%
BR6OX2/CYP85A2
48
1.65%
CODM/T6ODM
45
1.55%
GS
38
1.31%
CYP71
36
1.24%
IFR
31
1.07%
GES
29
1.0%
IO
29
1.0%
TPS
29
1.0%
H6H
26
0.89%
BBE
26
0.89%
LAC
26
0.89%
CAS
26
0.89%
TRI/TRII
24
0.83%
RAS
24
0.83%
F3'5'H/CYP75A
22
0.76%
CYP90D1
22
0.76%
T16H
21
0.72%
ANR
21
0.72%
CSE
21
0.72%
CCR
21
0.72%
PYKS
19
0.65%
DFR
19
0.65%
HCT
18
0.62%
TAT
17
0.58%
SLS
16
0.55%
PMT
16
0.55%
COMT
16
0.55%
CYP51G1
16
0.55%
F5H/CYP84A
15
0.52%
8HGO
14
0.48%
7DLH
14
0.48%
CPD/CYP90A1
14
0.48%
GGPPS
14
0.48%
LAMT
13
0.45%
SGD
13
0.45%
FNS
12
0.41%
CCoAOMT
12
0.41%
16OMT
11
0.38%
NCS
11
0.38%
G8O/G8H
11
0.38%
PMK
11
0.38%
CNMT
10
0.34%
ANS/LDOX
9
0.31%
PAL
9
0.31%
AACT
9
0.31%
FPPS
9
0.31%
MPO
8
0.28%
CYP80B1
8
0.28%
CPR
8
0.28%
SMO1/SMO2
7
0.24%
ROT3/CYP90C1
7
0.24%
HMGR
7
0.24%
DXR
7
0.24%
DXS
7
0.24%
MVK
7
0.24%
ISY
6
0.21%
CHS
6
0.21%
CYP719
5
0.17%
TDC
5
0.17%
BR6OX1/CYP85A1
5
0.17%
COR
4
0.14%
HPPR
4
0.14%
SQS/FDFT1
4
0.14%
SQE
4
0.14%
MVD
4
0.14%
FLS
3
0.1%
CHI
3
0.1%
DET2
3
0.1%
HDR/IspH
3
0.1%
MCT/IspD
3
0.1%
IDI
3
0.1%
MDS/IspF
3
0.1%
TYDC_DDC
2
0.07%
CYP80F1
2
0.07%
CPI1
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
CMK/IspE
2
0.07%
HMGS
2
0.07%
HDS/IspG
2
0.07%
ADC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
DWF5
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 377 | 19 | BAHD (123) | View species results |
| Phenylpropanoid pathway | 258 | 11 | POD (117) | View species results |
| Alkaloid pathway | 238 | 22 | 7DLGT (47) | View species results |
| Flavonoid pathway | 151 | 10 | UFGT (98) | View species results |
| Rosmarinic acid pathway | 119 | 7 | C4H (60) | View species results |
| Steroid pathway | 71 | 11 | SMT1/SMT2/SMT3 (32) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1069 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 216 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| striga_hermonthica_CAA0805801.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0805802.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0806718.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0806721.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0807489.1 | Phenylpropanoid | CAD | medium | pass | CAD__00014__sp_Q2KNL5_CADH1_OCIBA |
| striga_hermonthica_CAA0808660.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0810019.1 | Phenylpropanoid | CAD | low | borderline | CAD__00012__sp_Q02972_CADH8_ARATH |
| striga_hermonthica_CAA0812010.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0812443.1 | Phenylpropanoid | CAD | low | borderline | CAD__00009__sp_P42734_CADH9_ARATH |
| striga_hermonthica_CAA0812536.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0812537.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0813118.1 | Phenylpropanoid | CAD | low | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0813394.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| striga_hermonthica_CAA0814133.1 | Phenylpropanoid | CAD | low | borderline | CAD__00008__sp_O49482_CADH5_ARATH |
| striga_hermonthica_CAA0815231.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| striga_hermonthica_CAA0815304.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0815305.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0815346.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0815540.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0815893.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0816115.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0816253.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0817906.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0819650.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0821035.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0821036.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0822275.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0825142.1 | Phenylpropanoid | CAD | medium | pass | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0826547.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0827233.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0831079.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0831119.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0831120.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0831121.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0831123.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0831219.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0831662.1 | Phenylpropanoid | CAD | low | borderline | CAD__00012__sp_Q02972_CADH8_ARATH |
| striga_hermonthica_CAA0831802.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0832216.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0832217.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0833354.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0833476.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0833477.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0833562.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0835680.1 | Phenylpropanoid | CAD | low | borderline | CAD__00011__sp_Q02971_CADH7_ARATH |
| striga_hermonthica_CAA0835948.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0836094.1 | Phenylpropanoid | CAD | medium | borderline | CAD__00005__sp_G7IYC1_CAD2_MEDTR |
| striga_hermonthica_CAA0836098.1 | Phenylpropanoid | CAD | low | borderline | CAD__00006__sp_I1ZHA5_CAD_CHAFM |
| striga_hermonthica_CAA0836357.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |
| striga_hermonthica_CAA0836359.1 | Phenylpropanoid | CAD | medium | pass | CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE |