Striga hermonthica (striga_hermonthica)
/
Imported from atlas release summary for Striga hermonthica.
1214
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1214
Candidate Genes
C4H
6.19%
BAHD
5.99%
C3'H/CYP98A
5.44%
POD
4.34%
UGT
4.27%
CYP76
4.09%
4CL
3.82%
7DLGT
3.79%
Other Families
62.08%
More Families (95)
UFGT
109
3.75%
T3O
94
3.23%
IFS
92
3.17%
NMT
71
2.44%
DWF4/CYP90B1
69
2.37%
F3'H/CYP75B
66
2.27%
F3H
65
2.24%
CAD
61
2.1%
STR
55
1.89%
SMT1/SMT2/SMT3
54
1.86%
BR6OX2/CYP85A2
48
1.65%
CODM/T6ODM
45
1.55%
GS
38
1.31%
CYP71
36
1.24%
IFR
31
1.07%
GES
29
1.0%
IO
29
1.0%
TPS
29
1.0%
H6H
26
0.89%
BBE
26
0.89%
LAC
26
0.89%
CAS
26
0.89%
TRI/TRII
24
0.83%
RAS
24
0.83%
F3'5'H/CYP75A
22
0.76%
CYP90D1
22
0.76%
T16H
21
0.72%
ANR
21
0.72%
CSE
21
0.72%
CCR
21
0.72%
PYKS
19
0.65%
DFR
19
0.65%
HCT
18
0.62%
TAT
17
0.58%
SLS
16
0.55%
PMT
16
0.55%
COMT
16
0.55%
CYP51G1
16
0.55%
F5H/CYP84A
15
0.52%
8HGO
14
0.48%
7DLH
14
0.48%
CPD/CYP90A1
14
0.48%
GGPPS
14
0.48%
LAMT
13
0.45%
SGD
13
0.45%
FNS
12
0.41%
CCoAOMT
12
0.41%
16OMT
11
0.38%
NCS
11
0.38%
G8O/G8H
11
0.38%
PMK
11
0.38%
CNMT
10
0.34%
ANS/LDOX
9
0.31%
PAL
9
0.31%
AACT
9
0.31%
FPPS
9
0.31%
MPO
8
0.28%
CYP80B1
8
0.28%
CPR
8
0.28%
SMO1/SMO2
7
0.24%
ROT3/CYP90C1
7
0.24%
HMGR
7
0.24%
DXR
7
0.24%
DXS
7
0.24%
MVK
7
0.24%
ISY
6
0.21%
CHS
6
0.21%
CYP719
5
0.17%
TDC
5
0.17%
BR6OX1/CYP85A1
5
0.17%
COR
4
0.14%
HPPR
4
0.14%
SQS/FDFT1
4
0.14%
SQE
4
0.14%
MVD
4
0.14%
FLS
3
0.1%
CHI
3
0.1%
DET2
3
0.1%
HDR/IspH
3
0.1%
MCT/IspD
3
0.1%
IDI
3
0.1%
MDS/IspF
3
0.1%
TYDC_DDC
2
0.07%
CYP80F1
2
0.07%
CPI1
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
CMK/IspE
2
0.07%
HMGS
2
0.07%
HDS/IspG
2
0.07%
ADC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
DWF5
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 377 | 19 | BAHD (123) | View species results |
| Phenylpropanoid pathway | 258 | 11 | POD (117) | View species results |
| Alkaloid pathway | 238 | 22 | 7DLGT (47) | View species results |
| Flavonoid pathway | 151 | 10 | UFGT (98) | View species results |
| Rosmarinic acid pathway | 119 | 7 | C4H (60) | View species results |
| Steroid pathway | 71 | 11 | SMT1/SMT2/SMT3 (32) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1069 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 216 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| striga_hermonthica_CAA0824127.1 | Phenylpropanoid | POD | low | borderline | POD__00012__sp_Q10N21_APX1_ORYSJ |
| striga_hermonthica_CAA0824128.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| striga_hermonthica_CAA0824723.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| striga_hermonthica_CAA0824724.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0825576.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| striga_hermonthica_CAA0826228.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| striga_hermonthica_CAA0826447.1 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| striga_hermonthica_CAA0826626.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| striga_hermonthica_CAA0827012.1 | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| striga_hermonthica_CAA0827669.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| striga_hermonthica_CAA0827709.1 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| striga_hermonthica_CAA0827912.1 | Phenylpropanoid | POD | medium | pass | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| striga_hermonthica_CAA0828124.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| striga_hermonthica_CAA0828720.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| striga_hermonthica_CAA0829689.1 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| striga_hermonthica_CAA0829690.1 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| striga_hermonthica_CAA0829691.1 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| striga_hermonthica_CAA0829914.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0829915.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0830081.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| striga_hermonthica_CAA0831068.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0831069.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0831157.1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| striga_hermonthica_CAA0831420.1 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| striga_hermonthica_CAA0831444.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| striga_hermonthica_CAA0831453.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| striga_hermonthica_CAA0831463.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| striga_hermonthica_CAA0831548.1 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| striga_hermonthica_CAA0831789.1 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| striga_hermonthica_CAA0831794.1 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| striga_hermonthica_CAA0831953.1 | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| striga_hermonthica_CAA0832110.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0832354.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| striga_hermonthica_CAA0833122.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| striga_hermonthica_CAA0833237.1 | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| striga_hermonthica_CAA0833914.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| striga_hermonthica_CAA0833975.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| striga_hermonthica_CAA0834019.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0834020.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0834456.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| striga_hermonthica_CAA0834458.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| striga_hermonthica_CAA0834459.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| striga_hermonthica_CAA0834461.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| striga_hermonthica_CAA0834742.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| striga_hermonthica_CAA0834764.1 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| striga_hermonthica_CAA0835541.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| striga_hermonthica_CAA0835916.1 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| striga_hermonthica_CAA0836219.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| striga_hermonthica_CAA0836465.1 | Phenylpropanoid | POD | medium | pass | POD__00020__sp_Q9FE01_APX2_ORYSJ |
| striga_hermonthica_CAA0836483.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |