Striga hermonthica (striga_hermonthica)
/
Imported from atlas release summary for Striga hermonthica.
1449
Candidate Protein Records
1214
Pathway-Level Records
2906
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2906
Family-Level Calls
C4H
6.19%
BAHD
5.99%
C3'H/CYP98A
5.44%
POD
4.34%
UGT
4.27%
CYP76
4.09%
4CL
3.82%
7DLGT
3.79%
Other Families
62.08%
More Families (95)
UFGT
109
3.75%
T3O
94
3.23%
IFS
92
3.17%
NMT
71
2.44%
DWF4/CYP90B1
69
2.37%
F3'H/CYP75B
66
2.27%
F3H
65
2.24%
CAD
61
2.1%
STR
55
1.89%
SMT1/SMT2/SMT3
54
1.86%
BR6OX2/CYP85A2
48
1.65%
CODM/T6ODM
45
1.55%
GS
38
1.31%
CYP71
36
1.24%
IFR
31
1.07%
GES
29
1.0%
IO
29
1.0%
TPS
29
1.0%
H6H
26
0.89%
BBE
26
0.89%
LAC
26
0.89%
CAS
26
0.89%
TRI/TRII
24
0.83%
RAS
24
0.83%
F3'5'H/CYP75A
22
0.76%
CYP90D1
22
0.76%
T16H
21
0.72%
ANR
21
0.72%
CSE
21
0.72%
CCR
21
0.72%
PYKS
19
0.65%
DFR
19
0.65%
HCT
18
0.62%
TAT
17
0.58%
SLS
16
0.55%
PMT
16
0.55%
COMT
16
0.55%
CYP51G1
16
0.55%
F5H/CYP84A
15
0.52%
8HGO
14
0.48%
7DLH
14
0.48%
CPD/CYP90A1
14
0.48%
GGPPS
14
0.48%
LAMT
13
0.45%
SGD
13
0.45%
FNS
12
0.41%
CCoAOMT
12
0.41%
16OMT
11
0.38%
NCS
11
0.38%
G8O/G8H
11
0.38%
PMK
11
0.38%
CNMT
10
0.34%
ANS/LDOX
9
0.31%
PAL
9
0.31%
AACT
9
0.31%
FPPS
9
0.31%
MPO
8
0.28%
CYP80B1
8
0.28%
CPR
8
0.28%
SMO1/SMO2
7
0.24%
ROT3/CYP90C1
7
0.24%
HMGR
7
0.24%
DXR
7
0.24%
DXS
7
0.24%
MVK
7
0.24%
ISY
6
0.21%
CHS
6
0.21%
CYP719
5
0.17%
TDC
5
0.17%
BR6OX1/CYP85A1
5
0.17%
COR
4
0.14%
HPPR
4
0.14%
SQS/FDFT1
4
0.14%
SQE
4
0.14%
MVD
4
0.14%
FLS
3
0.1%
CHI
3
0.1%
DET2
3
0.1%
HDR/IspH
3
0.1%
MCT/IspD
3
0.1%
IDI
3
0.1%
MDS/IspF
3
0.1%
TYDC_DDC
2
0.07%
CYP80F1
2
0.07%
CPI1
2
0.07%
DWF7
2
0.07%
HYD1
2
0.07%
CMK/IspE
2
0.07%
HMGS
2
0.07%
HDS/IspG
2
0.07%
ADC
1
0.03%
XMT_MXMT_DXMT
1
0.03%
FK
1
0.03%
DWF1
1
0.03%
DWF5
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 377 | 19 | BAHD (123) | View species results |
| Phenylpropanoid pathway | 258 | 11 | POD (117) | View species results |
| Alkaloid pathway | 238 | 22 | 7DLGT (47) | View species results |
| Flavonoid pathway | 151 | 10 | UFGT (98) | View species results |
| Rosmarinic acid pathway | 119 | 7 | C4H (60) | View species results |
| Steroid pathway | 71 | 11 | SMT1/SMT2/SMT3 (32) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1069 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 216 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| striga_hermonthica_CAA0819098.1 | Terpenoid | GGPPS | medium | borderline |
| striga_hermonthica_CAA0819099.1 | Terpenoid | GGPPS | medium | borderline |
| striga_hermonthica_CAA0823731.1 | Terpenoid | GGPPS | medium | borderline |
| striga_hermonthica_CAA0825513.1 | Terpenoid | GGPPS | low | borderline |
| striga_hermonthica_CAA0831589.1 | Terpenoid | GGPPS | medium | borderline |
| striga_hermonthica_CAA0832810.1 | Terpenoid | GGPPS | medium | borderline |
| striga_hermonthica_CAA0833006.1 | Terpenoid | GGPPS | medium | borderline |
| striga_hermonthica_CAA0839223.1 | Terpenoid | GGPPS | medium | borderline |
| striga_hermonthica_CAA0807583.1 | Terpenoid | HDR/IspH | high | pass |
| striga_hermonthica_CAA0827590.1 | Terpenoid | HDR/IspH | low | borderline |
| striga_hermonthica_CAA0827599.1 | Terpenoid | HDR/IspH | high | pass |
| striga_hermonthica_CAA0823189.1 | Terpenoid | HDS/IspG | high | pass |
| striga_hermonthica_CAA0840678.1 | Terpenoid | HDS/IspG | low | borderline |
| striga_hermonthica_CAA0806983.1 | Terpenoid | HMGR | medium | pass |
| striga_hermonthica_CAA0816814.1 | Terpenoid | HMGR | medium | pass |
| striga_hermonthica_CAA0821268.1 | Terpenoid | HMGR | low | borderline |
| striga_hermonthica_CAA0823219.1 | Terpenoid | HMGR | medium | pass |
| striga_hermonthica_CAA0830094.1 | Terpenoid | HMGR | medium | pass |
| striga_hermonthica_CAA0833922.1 | Terpenoid | HMGR | low | borderline |
| striga_hermonthica_CAA0838476.1 | Terpenoid | HMGR | medium | pass |
| striga_hermonthica_CAA0820537.1 | Terpenoid | HMGS | high | pass |
| striga_hermonthica_CAA0842261.1 | Terpenoid | HMGS | high | pass |
| striga_hermonthica_CAA0814351.1 | Terpenoid | IDI | medium | pass |
| striga_hermonthica_CAA0829596.1 | Terpenoid | IDI | medium | pass |
| striga_hermonthica_CAA0832689.1 | Terpenoid | IDI | medium | pass |
| striga_hermonthica_CAA0810944.1 | Terpenoid | MCT/IspD | high | pass |
| striga_hermonthica_CAA0823819.1 | Terpenoid | MCT/IspD | low | borderline |
| striga_hermonthica_CAA0832223.1 | Terpenoid | MCT/IspD | low | borderline |
| striga_hermonthica_CAA0815884.1 | Terpenoid | MDS/IspF | low | borderline |
| striga_hermonthica_CAA0838190.1 | Terpenoid | MDS/IspF | high | pass |
| striga_hermonthica_CAA0838788.1 | Terpenoid | MDS/IspF | high | pass |
| striga_hermonthica_CAA0814400.1 | Terpenoid | MVD | low | borderline |
| striga_hermonthica_CAA0814405.1 | Terpenoid | MVD | medium | pass |
| striga_hermonthica_CAA0816508.1 | Terpenoid | MVD | low | borderline |
| striga_hermonthica_CAA0836089.1 | Terpenoid | MVD | medium | pass |
| striga_hermonthica_CAA0815581.1 | Terpenoid | MVK | medium | pass |
| striga_hermonthica_CAA0824122.1 | Terpenoid | MVK | low | borderline |
| striga_hermonthica_CAA0825514.1 | Terpenoid | MVK | low | borderline |
| striga_hermonthica_CAA0827194.1 | Terpenoid | MVK | low | borderline |
| striga_hermonthica_CAA0828610.1 | Terpenoid | MVK | low | borderline |
| striga_hermonthica_CAA0834611.1 | Terpenoid | MVK | low | borderline |
| striga_hermonthica_CAA0834872.1 | Terpenoid | MVK | low | borderline |
| striga_hermonthica_CAA0811690.1 | Terpenoid | PMK | medium | pass |
| striga_hermonthica_CAA0811692.1 | Terpenoid | PMK | medium | pass |
| striga_hermonthica_CAA0815796.1 | Terpenoid | PMK | medium | pass |
| striga_hermonthica_CAA0822798.1 | Terpenoid | PMK | medium | pass |
| striga_hermonthica_CAA0822838.1 | Terpenoid | PMK | medium | pass |
| striga_hermonthica_CAA0825908.1 | Terpenoid | PMK | medium | pass |
| striga_hermonthica_CAA0835639.1 | Terpenoid | PMK | medium | pass |
| striga_hermonthica_CAA0835740.1 | Terpenoid | PMK | medium | pass |