Syringa oblata (syringa_oblata)
Imported from atlas release summary for Syringa oblata.
2190
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2190
Candidate Genes
C4H
7.1%
BAHD
5.84%
UGT
4.47%
C3'H/CYP98A
4.36%
7DLGT
4.25%
UFGT
4.16%
4CL
3.62%
POD
3.44%
Other Families
62.76%
More Families (97)
CYP76
169
3.05%
IFS
135
2.43%
F3H
134
2.41%
CAD
125
2.25%
F3'H/CYP75B
124
2.23%
NMT
123
2.22%
T3O
122
2.2%
TPS
115
2.07%
GES
103
1.86%
SMT1/SMT2/SMT3
98
1.77%
CAS
95
1.71%
CYP71
94
1.69%
STR
88
1.59%
CODM/T6ODM
87
1.57%
G8O/G8H
82
1.48%
DWF4/CYP90B1
70
1.26%
BR6OX2/CYP85A2
69
1.24%
H6H
67
1.21%
SGD
64
1.15%
LAC
63
1.14%
FNS
56
1.01%
CSE
56
1.01%
F5H/CYP84A
50
0.9%
7DLH
49
0.88%
HCT
49
0.88%
T16H
48
0.86%
BBE
48
0.86%
PYKS
46
0.83%
TRI/TRII
45
0.81%
GS
45
0.81%
IFR
45
0.81%
CYP90D1
45
0.81%
RAS
44
0.79%
IO
41
0.74%
F3'5'H/CYP75A
37
0.67%
TAT
36
0.65%
CPD/CYP90A1
33
0.59%
ANR
32
0.58%
COMT
32
0.58%
PMT
30
0.54%
16OMT
26
0.47%
GGPPS
26
0.47%
NCS
25
0.45%
CCR
25
0.45%
FPPS
25
0.45%
SLS
23
0.41%
CPR
23
0.41%
AACT
22
0.4%
ANS/LDOX
21
0.38%
LAMT
20
0.36%
COR
20
0.36%
CYP80B1
18
0.32%
PAL
18
0.32%
SQS/FDFT1
17
0.31%
8HGO
16
0.29%
DFR
16
0.29%
HMGR
15
0.27%
DXS
14
0.25%
SQE
13
0.23%
BR6OX1/CYP85A1
12
0.22%
CYP51G1
12
0.22%
ISY
11
0.2%
ROT3/CYP90C1
11
0.2%
CHS
10
0.18%
SMO1/SMO2
10
0.18%
HDR/IspH
9
0.16%
CNMT
8
0.14%
CCoAOMT
8
0.14%
HPPR
8
0.14%
MVK
8
0.14%
HMGS
8
0.14%
MPO
7
0.13%
XMT_MXMT_DXMT
6
0.11%
DXR
6
0.11%
MVD
6
0.11%
CYP719
5
0.09%
TYDC_DDC
5
0.09%
FLS
5
0.09%
HDS/IspG
5
0.09%
ADC
4
0.07%
CHI
4
0.07%
DET2
4
0.07%
IDI
4
0.07%
PMK
4
0.07%
CYP80F1
3
0.05%
TDC
3
0.05%
HYD1
3
0.05%
CMK/IspE
3
0.05%
DWF5
2
0.04%
DWF7
2
0.04%
CPI1
2
0.04%
MCT/IspD
2
0.04%
GPPS
2
0.04%
6OMT_4OMT_SOMT
1
0.02%
FK
1
0.02%
DWF1
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 707 | 20 | BAHD (220) | View species results |
| Alkaloid pathway | 516 | 23 | 7DLGT (109) | View species results |
| Phenylpropanoid pathway | 389 | 12 | POD (153) | View species results |
| Flavonoid pathway | 294 | 11 | UFGT (214) | View species results |
| Steroid pathway | 153 | 12 | CAS (62) | View species results |
| Rosmarinic acid pathway | 131 | 7 | 4CL (39) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1888 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 417 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| syringa_oblata_Ob0230088.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0230221.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0230477.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0230559.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0232059.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0232193.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0232194.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0232206.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0232375.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0233356.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0234855.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0235959.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0236403.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0236731.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0236827.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0238119.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0238609.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0238764.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0240175.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0240890.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0240961.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0242677.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0242702.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0244062.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0244136.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0244137.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0244290.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0244851.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0245182.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0245935.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0245936.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0246117.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0248258.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0249983.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0250031.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0251223.1 | Alkaloid | STR | low | borderline |
| syringa_oblata_Ob0253917.1 | Alkaloid | STR | medium | pass |
| syringa_oblata_Ob0253924.1 | Alkaloid | STR | low | borderline |