Tagetes erecta (tagetes_erecta)
Imported from atlas release summary for Tagetes erecta.
1880
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1880
Candidate Genes
C4H
7.18%
C3'H/CYP98A
6.95%
BAHD
6.81%
CYP76
4.66%
IFS
4.47%
UGT
3.88%
T3O
3.83%
UFGT
3.58%
Other Families
58.64%
More Families (97)
7DLGT
169
3.56%
4CL
146
3.08%
POD
127
2.68%
DWF4/CYP90B1
119
2.51%
F3'H/CYP75B
103
2.17%
F3H
98
2.06%
BR6OX2/CYP85A2
97
2.04%
SMT1/SMT2/SMT3
86
1.81%
STR
83
1.75%
NMT
71
1.5%
TPS
68
1.43%
GES
66
1.39%
CAS
66
1.39%
CYP71
60
1.26%
CODM/T6ODM
59
1.24%
CYP90D1
59
1.24%
CAD
58
1.22%
H6H
50
1.05%
CSE
49
1.03%
HCT
47
0.99%
TAT
46
0.97%
COMT
43
0.91%
PYKS
42
0.88%
G8O/G8H
41
0.86%
T16H
39
0.82%
F3'5'H/CYP75A
38
0.8%
RAS
37
0.78%
TRI/TRII
36
0.76%
7DLH
36
0.76%
IO
34
0.72%
16OMT
33
0.7%
LAC
31
0.65%
F5H/CYP84A
30
0.63%
BBE
29
0.61%
PMT
28
0.59%
SLS
27
0.57%
PAL
27
0.57%
SGD
26
0.55%
GS
26
0.55%
FNS
25
0.53%
CYP51G1
25
0.53%
IFR
24
0.51%
CPD/CYP90A1
24
0.51%
NCS
21
0.44%
CCoAOMT
21
0.44%
8HGO
17
0.36%
ANR
15
0.32%
COR
14
0.29%
BR6OX1/CYP85A1
14
0.29%
LAMT
13
0.27%
ANS/LDOX
13
0.27%
ROT3/CYP90C1
12
0.25%
MPO
11
0.23%
CYP719
11
0.23%
CHI
10
0.21%
CYP80B1
9
0.19%
TYDC_DDC
9
0.19%
CPR
9
0.19%
GGPPS
9
0.19%
CHS
8
0.17%
CCR
8
0.17%
HPPR
8
0.17%
AACT
8
0.17%
ISY
7
0.15%
DET2
7
0.15%
SQE
7
0.15%
CNMT
6
0.13%
SQS/FDFT1
6
0.13%
SMO1/SMO2
6
0.13%
FPPS
6
0.13%
HMGR
6
0.13%
DXS
6
0.13%
DWF7
5
0.11%
XMT_MXMT_DXMT
4
0.08%
DXR
4
0.08%
HMGS
4
0.08%
MVK
4
0.08%
MVD
4
0.08%
DWF1
3
0.06%
MCT/IspD
3
0.06%
PMK
3
0.06%
HDS/IspG
3
0.06%
ADC
2
0.04%
6OMT_4OMT_SOMT
2
0.04%
FK
2
0.04%
HDR/IspH
2
0.04%
IDI
2
0.04%
CMK/IspE
2
0.04%
CYP80F1
1
0.02%
ODC
1
0.02%
TDC
1
0.02%
DFR
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
GPPS
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 644 | 19 | BAHD (262) | View species results |
| Alkaloid pathway | 350 | 21 | 7DLGT (72) | View species results |
| Phenylpropanoid pathway | 333 | 11 | POD (116) | View species results |
| Flavonoid pathway | 218 | 9 | UFGT (160) | View species results |
| Rosmarinic acid pathway | 198 | 7 | C4H (94) | View species results |
| Steroid pathway | 137 | 10 | SMT1/SMT2/SMT3 (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2065 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 407 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| tagetes_erecta_GWHPDOCX031179 | Alkaloid | NMT | low | borderline | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| tagetes_erecta_GWHPDOCX031850 | Alkaloid | NMT | medium | pass | NMT__00001__sp_A0A075D654_ANMT_RAUSE |
| tagetes_erecta_GWHPDOCX032352 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| tagetes_erecta_GWHPDOCX032456 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| tagetes_erecta_GWHPDOCX034586 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| tagetes_erecta_GWHPDOCX036234 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| tagetes_erecta_GWHPDOCX036304 | Alkaloid | NMT | medium | borderline | NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB |
| tagetes_erecta_GWHPDOCX036546 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| tagetes_erecta_GWHPDOCX036819 | Alkaloid | NMT | medium | pass | NMT__00034__sp_Q5VN06_CLF_ORYSJ |
| tagetes_erecta_GWHPDOCX037018 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| tagetes_erecta_GWHPDOCX037267 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| tagetes_erecta_GWHPDOCX037315 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| tagetes_erecta_GWHPDOCX037573 | Alkaloid | NMT | medium | pass | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| tagetes_erecta_GWHPDOCX037784 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| tagetes_erecta_GWHPDOCX037821 | Alkaloid | NMT | medium | pass | NMT__00001__sp_A0A075D654_ANMT_RAUSE |
| tagetes_erecta_GWHPDOCX038722 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| tagetes_erecta_GWHPDOCX038958 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| tagetes_erecta_GWHPDOCX039300 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| tagetes_erecta_GWHPDOCX041708 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| tagetes_erecta_GWHPDOCX041950 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| tagetes_erecta_GWHPDOCX042155 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |