Tagetes erecta (tagetes_erecta)
Imported from atlas release summary for Tagetes erecta.
2078
Candidate Protein Records
1880
Pathway-Level Records
4746
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
4746
Family-Level Calls
C4H
7.18%
C3'H/CYP98A
6.95%
BAHD
6.81%
CYP76
4.66%
IFS
4.47%
UGT
3.88%
T3O
3.83%
UFGT
3.58%
Other Families
58.64%
More Families (97)
7DLGT
169
3.56%
4CL
146
3.08%
POD
127
2.68%
DWF4/CYP90B1
119
2.51%
F3'H/CYP75B
103
2.17%
F3H
98
2.06%
BR6OX2/CYP85A2
97
2.04%
SMT1/SMT2/SMT3
86
1.81%
STR
83
1.75%
NMT
71
1.5%
TPS
68
1.43%
GES
66
1.39%
CAS
66
1.39%
CYP71
60
1.26%
CODM/T6ODM
59
1.24%
CYP90D1
59
1.24%
CAD
58
1.22%
H6H
50
1.05%
CSE
49
1.03%
HCT
47
0.99%
TAT
46
0.97%
COMT
43
0.91%
PYKS
42
0.88%
G8O/G8H
41
0.86%
T16H
39
0.82%
F3'5'H/CYP75A
38
0.8%
RAS
37
0.78%
TRI/TRII
36
0.76%
7DLH
36
0.76%
IO
34
0.72%
16OMT
33
0.7%
LAC
31
0.65%
F5H/CYP84A
30
0.63%
BBE
29
0.61%
PMT
28
0.59%
SLS
27
0.57%
PAL
27
0.57%
SGD
26
0.55%
GS
26
0.55%
FNS
25
0.53%
CYP51G1
25
0.53%
IFR
24
0.51%
CPD/CYP90A1
24
0.51%
NCS
21
0.44%
CCoAOMT
21
0.44%
8HGO
17
0.36%
ANR
15
0.32%
COR
14
0.29%
BR6OX1/CYP85A1
14
0.29%
LAMT
13
0.27%
ANS/LDOX
13
0.27%
ROT3/CYP90C1
12
0.25%
MPO
11
0.23%
CYP719
11
0.23%
CHI
10
0.21%
CYP80B1
9
0.19%
TYDC_DDC
9
0.19%
CPR
9
0.19%
GGPPS
9
0.19%
CHS
8
0.17%
CCR
8
0.17%
HPPR
8
0.17%
AACT
8
0.17%
ISY
7
0.15%
DET2
7
0.15%
SQE
7
0.15%
CNMT
6
0.13%
SQS/FDFT1
6
0.13%
SMO1/SMO2
6
0.13%
FPPS
6
0.13%
HMGR
6
0.13%
DXS
6
0.13%
DWF7
5
0.11%
XMT_MXMT_DXMT
4
0.08%
DXR
4
0.08%
HMGS
4
0.08%
MVK
4
0.08%
MVD
4
0.08%
DWF1
3
0.06%
MCT/IspD
3
0.06%
PMK
3
0.06%
HDS/IspG
3
0.06%
ADC
2
0.04%
6OMT_4OMT_SOMT
2
0.04%
FK
2
0.04%
HDR/IspH
2
0.04%
IDI
2
0.04%
CMK/IspE
2
0.04%
CYP80F1
1
0.02%
ODC
1
0.02%
TDC
1
0.02%
DFR
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
GPPS
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 644 | 19 | BAHD (262) | View species results |
| Alkaloid pathway | 350 | 21 | 7DLGT (72) | View species results |
| Phenylpropanoid pathway | 333 | 11 | POD (116) | View species results |
| Flavonoid pathway | 218 | 9 | UFGT (160) | View species results |
| Rosmarinic acid pathway | 198 | 7 | C4H (94) | View species results |
| Steroid pathway | 137 | 10 | SMT1/SMT2/SMT3 (64) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2065 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 407 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| tagetes_erecta_GWHPDOCX017339 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX017340 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX017341 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX018307 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX019120 | Alkaloid | GS | high | pass |
| tagetes_erecta_GWHPDOCX022353 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX023680 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX025862 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX027383 | Alkaloid | GS | high | pass |
| tagetes_erecta_GWHPDOCX031157 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX031197 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX031515 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX031516 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX033488 | Alkaloid | GS | medium | pass |
| tagetes_erecta_GWHPDOCX035694 | Alkaloid | GS | medium | pass |
| tagetes_erecta_GWHPDOCX037166 | Alkaloid | GS | high | pass |
| tagetes_erecta_GWHPDOCX037167 | Alkaloid | GS | high | pass |
| tagetes_erecta_GWHPDOCX037168 | Alkaloid | GS | high | pass |
| tagetes_erecta_GWHPDOCX037169 | Alkaloid | GS | high | pass |
| tagetes_erecta_GWHPDOCX037170 | Alkaloid | GS | low | borderline |
| tagetes_erecta_GWHPDOCX037171 | Alkaloid | GS | high | pass |
| tagetes_erecta_GWHPDOCX001787 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX003190 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX004049 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX005018 | Alkaloid | H6H | high | pass |
| tagetes_erecta_GWHPDOCX005185 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX007226 | Alkaloid | H6H | medium | pass |
| tagetes_erecta_GWHPDOCX008125 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX011004 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX011005 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX011007 | Alkaloid | H6H | medium | pass |
| tagetes_erecta_GWHPDOCX013046 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX013134 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX013135 | Alkaloid | H6H | medium | pass |
| tagetes_erecta_GWHPDOCX013602 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX014281 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX014375 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX015178 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX015461 | Alkaloid | H6H | high | pass |
| tagetes_erecta_GWHPDOCX021464 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX022197 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX022235 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX022236 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX022237 | Alkaloid | H6H | medium | borderline |
| tagetes_erecta_GWHPDOCX023814 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX024238 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX025589 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX025798 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX025932 | Alkaloid | H6H | low | borderline |
| tagetes_erecta_GWHPDOCX025933 | Alkaloid | H6H | low | borderline |