Tapiscia sinensis (tapiscia_sinensis)
Imported from atlas release summary for Tapiscia sinensis.
1246
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1246
Candidate Genes
BAHD
6.06%
C4H
5.63%
C3'H/CYP98A
5.45%
UGT
5.35%
7DLGT
4.78%
UFGT
4.56%
4CL
4.49%
IFS
3.57%
Other Families
60.11%
More Families (97)
POD
100
3.57%
CYP76
97
3.46%
T3O
89
3.17%
F3H
76
2.71%
DWF4/CYP90B1
67
2.39%
NMT
58
2.07%
F3'H/CYP75B
48
1.71%
STR
46
1.64%
CAD
45
1.6%
SMT1/SMT2/SMT3
43
1.53%
H6H
40
1.43%
CODM/T6ODM
40
1.43%
TRI/TRII
37
1.32%
LAC
33
1.18%
CYP71
32
1.14%
TAT
31
1.11%
GS
30
1.07%
BR6OX2/CYP85A2
30
1.07%
CYP90D1
28
1.0%
IO
27
0.96%
IFR
27
0.96%
CSE
27
0.96%
HCT
26
0.93%
CAS
26
0.93%
T16H
23
0.82%
ANR
22
0.78%
PYKS
21
0.75%
PMT
21
0.75%
FNS
20
0.71%
NCS
18
0.64%
LAMT
18
0.64%
CCR
17
0.61%
TPS
17
0.61%
G8O/G8H
16
0.57%
RAS
16
0.57%
BR6OX1/CYP85A1
16
0.57%
COR
15
0.53%
GES
15
0.53%
PAL
15
0.53%
CPD/CYP90A1
15
0.53%
7DLH
13
0.46%
BBE
13
0.46%
CNMT
12
0.43%
SGD
12
0.43%
SLS
11
0.39%
F3'5'H/CYP75A
11
0.39%
CHS
11
0.39%
DFR
11
0.39%
ANS/LDOX
11
0.39%
MPO
10
0.36%
F5H/CYP84A
10
0.36%
COMT
9
0.32%
CYP51G1
9
0.32%
ROT3/CYP90C1
8
0.29%
8HGO
7
0.25%
ISY
7
0.25%
CCoAOMT
7
0.25%
GGPPS
7
0.25%
FPPS
7
0.25%
CPR
6
0.21%
SQE
6
0.21%
DXS
6
0.21%
AACT
6
0.21%
CYP80B1
5
0.18%
16OMT
5
0.18%
HPPR
5
0.18%
DET2
5
0.18%
SQS/FDFT1
5
0.18%
HMGR
5
0.18%
CYP719
4
0.14%
CHI
4
0.14%
SMO1/SMO2
4
0.14%
MVK
4
0.14%
MVD
4
0.14%
ODC
3
0.11%
TYDC_DDC
3
0.11%
MCT/IspD
3
0.11%
XMT_MXMT_DXMT
2
0.07%
TDC
2
0.07%
FLS
2
0.07%
DWF7
2
0.07%
DWF1
2
0.07%
PMK
2
0.07%
IDI
2
0.07%
MDS/IspF
2
0.07%
HDS/IspG
2
0.07%
CYP80F1
1
0.04%
6OMT_4OMT_SOMT
1
0.04%
ADC
1
0.04%
CPI1
1
0.04%
HYD1
1
0.04%
DWF5
1
0.04%
FK
1
0.04%
DXR
1
0.04%
CMK/IspE
1
0.04%
HDR/IspH
1
0.04%
HMGS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 375 | 19 | UGT (139) | View species results |
| Alkaloid pathway | 263 | 22 | 7DLGT (57) | View species results |
| Phenylpropanoid pathway | 236 | 11 | POD (94) | View species results |
| Flavonoid pathway | 181 | 12 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 115 | 7 | C4H (37) | View species results |
| Steroid pathway | 76 | 14 | SMT1/SMT2/SMT3 (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 971 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 212 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| tapiscia_sinensis_evm.model.scaf_104.106 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_104.117 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_17.326 | Alkaloid | IO | medium | pass |
| tapiscia_sinensis_evm.model.scaf_26.218 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_28.554_evm.model.scaf_28.555 | Alkaloid | IO | low | borderline |
| tapiscia_sinensis_evm.model.scaf_283.428 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_37.288 | Alkaloid | IO | low | borderline |
| tapiscia_sinensis_evm.model.scaf_395.82 | Alkaloid | IO | low | borderline |
| tapiscia_sinensis_evm.model.scaf_43.462 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_458.234 | Alkaloid | IO | low | borderline |
| tapiscia_sinensis_evm.model.scaf_458.692 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_458.805 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_54.87 | Alkaloid | IO | low | borderline |
| tapiscia_sinensis_evm.model.scaf_57.205 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_57.28 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_57.30 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_58.423 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_6.362 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_6.363 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_6.364 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_6.365 | Alkaloid | IO | medium | pass |
| tapiscia_sinensis_evm.model.scaf_6.366 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_6.368_evm.model.scaf_6.369 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_6.370 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_70.158 | Alkaloid | IO | medium | pass |
| tapiscia_sinensis_evm.model.scaf_79.440 | Alkaloid | IO | medium | borderline |
| tapiscia_sinensis_evm.model.scaf_85.289 | Alkaloid | IO | low | borderline |