Tapiscia sinensis (tapiscia_sinensis)
Imported from atlas release summary for Tapiscia sinensis.
1246
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1246
Candidate Genes
BAHD
6.06%
C4H
5.63%
C3'H/CYP98A
5.45%
UGT
5.35%
7DLGT
4.78%
UFGT
4.56%
4CL
4.49%
IFS
3.57%
Other Families
60.11%
More Families (97)
POD
100
3.57%
CYP76
97
3.46%
T3O
89
3.17%
F3H
76
2.71%
DWF4/CYP90B1
67
2.39%
NMT
58
2.07%
F3'H/CYP75B
48
1.71%
STR
46
1.64%
CAD
45
1.6%
SMT1/SMT2/SMT3
43
1.53%
H6H
40
1.43%
CODM/T6ODM
40
1.43%
TRI/TRII
37
1.32%
LAC
33
1.18%
CYP71
32
1.14%
TAT
31
1.11%
GS
30
1.07%
BR6OX2/CYP85A2
30
1.07%
CYP90D1
28
1.0%
IO
27
0.96%
IFR
27
0.96%
CSE
27
0.96%
HCT
26
0.93%
CAS
26
0.93%
T16H
23
0.82%
ANR
22
0.78%
PYKS
21
0.75%
PMT
21
0.75%
FNS
20
0.71%
NCS
18
0.64%
LAMT
18
0.64%
CCR
17
0.61%
TPS
17
0.61%
G8O/G8H
16
0.57%
RAS
16
0.57%
BR6OX1/CYP85A1
16
0.57%
COR
15
0.53%
GES
15
0.53%
PAL
15
0.53%
CPD/CYP90A1
15
0.53%
7DLH
13
0.46%
BBE
13
0.46%
CNMT
12
0.43%
SGD
12
0.43%
SLS
11
0.39%
F3'5'H/CYP75A
11
0.39%
CHS
11
0.39%
DFR
11
0.39%
ANS/LDOX
11
0.39%
MPO
10
0.36%
F5H/CYP84A
10
0.36%
COMT
9
0.32%
CYP51G1
9
0.32%
ROT3/CYP90C1
8
0.29%
8HGO
7
0.25%
ISY
7
0.25%
CCoAOMT
7
0.25%
GGPPS
7
0.25%
FPPS
7
0.25%
CPR
6
0.21%
SQE
6
0.21%
DXS
6
0.21%
AACT
6
0.21%
CYP80B1
5
0.18%
16OMT
5
0.18%
HPPR
5
0.18%
DET2
5
0.18%
SQS/FDFT1
5
0.18%
HMGR
5
0.18%
CYP719
4
0.14%
CHI
4
0.14%
SMO1/SMO2
4
0.14%
MVK
4
0.14%
MVD
4
0.14%
ODC
3
0.11%
TYDC_DDC
3
0.11%
MCT/IspD
3
0.11%
XMT_MXMT_DXMT
2
0.07%
TDC
2
0.07%
FLS
2
0.07%
DWF7
2
0.07%
DWF1
2
0.07%
PMK
2
0.07%
IDI
2
0.07%
MDS/IspF
2
0.07%
HDS/IspG
2
0.07%
CYP80F1
1
0.04%
6OMT_4OMT_SOMT
1
0.04%
ADC
1
0.04%
CPI1
1
0.04%
HYD1
1
0.04%
DWF5
1
0.04%
FK
1
0.04%
DXR
1
0.04%
CMK/IspE
1
0.04%
HDR/IspH
1
0.04%
HMGS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 375 | 19 | UGT (139) | View species results |
| Alkaloid pathway | 263 | 22 | 7DLGT (57) | View species results |
| Phenylpropanoid pathway | 236 | 11 | POD (94) | View species results |
| Flavonoid pathway | 181 | 12 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 115 | 7 | C4H (37) | View species results |
| Steroid pathway | 76 | 14 | SMT1/SMT2/SMT3 (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 971 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 212 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| tapiscia_sinensis_evm.model.scaf_1.203 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| tapiscia_sinensis_evm.model.scaf_1.76 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| tapiscia_sinensis_evm.model.scaf_12.138 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| tapiscia_sinensis_evm.model.scaf_12.150 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| tapiscia_sinensis_evm.model.scaf_12.180 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| tapiscia_sinensis_evm.model.scaf_12.293 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| tapiscia_sinensis_evm.model.scaf_13.317 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| tapiscia_sinensis_evm.model.scaf_154.47 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| tapiscia_sinensis_evm.model.scaf_17.112 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| tapiscia_sinensis_evm.model.scaf_176.150 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| tapiscia_sinensis_evm.model.scaf_19.148 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| tapiscia_sinensis_evm.model.scaf_19.73 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| tapiscia_sinensis_evm.model.scaf_23.23 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| tapiscia_sinensis_evm.model.scaf_24.23 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| tapiscia_sinensis_evm.model.scaf_26.274.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| tapiscia_sinensis_evm.model.scaf_26.37 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| tapiscia_sinensis_evm.model.scaf_263.31 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| tapiscia_sinensis_evm.model.scaf_28.132_evm.model.scaf_28.133 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| tapiscia_sinensis_evm.model.scaf_28.539 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| tapiscia_sinensis_evm.model.scaf_28.594 | Alkaloid | NMT | low | borderline | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| tapiscia_sinensis_evm.model.scaf_28.87 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| tapiscia_sinensis_evm.model.scaf_283.130_evm.model.scaf_283.131 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| tapiscia_sinensis_evm.model.scaf_3.287 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| tapiscia_sinensis_evm.model.scaf_3.505 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| tapiscia_sinensis_evm.model.scaf_3.780 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| tapiscia_sinensis_evm.model.scaf_35.75.3 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| tapiscia_sinensis_evm.model.scaf_351.49 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| tapiscia_sinensis_evm.model.scaf_37.91.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| tapiscia_sinensis_evm.model.scaf_382.8 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| tapiscia_sinensis_evm.model.scaf_393.48 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| tapiscia_sinensis_evm.model.scaf_395.8 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| tapiscia_sinensis_evm.model.scaf_40.123 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| tapiscia_sinensis_evm.model.scaf_41.92 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| tapiscia_sinensis_evm.model.scaf_43.18 | Alkaloid | NMT | medium | pass | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| tapiscia_sinensis_evm.model.scaf_43.185 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| tapiscia_sinensis_evm.model.scaf_43.346 | Alkaloid | NMT | medium | borderline | NMT__00058__sp_Q9FZN8_TCS1_CAMSI |
| tapiscia_sinensis_evm.model.scaf_458.214 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| tapiscia_sinensis_evm.model.scaf_458.789.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| tapiscia_sinensis_evm.model.scaf_458.798 | Alkaloid | NMT | low | borderline | NMT__00033__sp_Q5QD03_SUVH3_CHLRE |
| tapiscia_sinensis_evm.model.scaf_470.8 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| tapiscia_sinensis_evm.model.scaf_549.243 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| tapiscia_sinensis_evm.model.scaf_556.172 | Alkaloid | NMT | low | borderline | NMT__00059__sp_Q9M571_PEAMT_SPIOL |
| tapiscia_sinensis_evm.model.scaf_57.173 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| tapiscia_sinensis_evm.model.scaf_58.628 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| tapiscia_sinensis_evm.model.scaf_58.659_evm.model.scaf_58.660 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| tapiscia_sinensis_evm.model.scaf_6.406 | Alkaloid | NMT | medium | pass | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| tapiscia_sinensis_evm.model.scaf_6.408 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| tapiscia_sinensis_evm.model.scaf_6.654 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| tapiscia_sinensis_evm.model.scaf_62.378 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| tapiscia_sinensis_evm.model.scaf_63.26 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |