PlantSME Plant secondary metabolism enzyme database

Tapiscia sinensis (tapiscia_sinensis)

Imported from atlas release summary for Tapiscia sinensis.

1386
Candidate Protein Records
1246
Pathway-Level Records
2805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.1% Alkaloid pathway 21.11% Phenylpropanoid pathway 18.94% Flavonoid pathway 14.53% Rosmarinic acid pathway 9.23% Steroid pathway 6.1%
Family Distribution
BAHD 6.06% C4H 5.63% C3'H/CYP98A 5.45% UGT 5.35% 7DLGT 4.78% UFGT 4.56% 4CL 4.49% IFS 3.57%
Other Families 60.11%
More Families (97)
POD 100 3.57% CYP76 97 3.46% T3O 89 3.17% F3H 76 2.71% DWF4/CYP90B1 67 2.39% NMT 58 2.07% F3'H/CYP75B 48 1.71% STR 46 1.64% CAD 45 1.6% SMT1/SMT2/SMT3 43 1.53% H6H 40 1.43% CODM/T6ODM 40 1.43% TRI/TRII 37 1.32% LAC 33 1.18% CYP71 32 1.14% TAT 31 1.11% GS 30 1.07% BR6OX2/CYP85A2 30 1.07% CYP90D1 28 1.0% IO 27 0.96% IFR 27 0.96% CSE 27 0.96% HCT 26 0.93% CAS 26 0.93% T16H 23 0.82% ANR 22 0.78% PYKS 21 0.75% PMT 21 0.75% FNS 20 0.71% NCS 18 0.64% LAMT 18 0.64% CCR 17 0.61% TPS 17 0.61% G8O/G8H 16 0.57% RAS 16 0.57% BR6OX1/CYP85A1 16 0.57% COR 15 0.53% GES 15 0.53% PAL 15 0.53% CPD/CYP90A1 15 0.53% 7DLH 13 0.46% BBE 13 0.46% CNMT 12 0.43% SGD 12 0.43% SLS 11 0.39% F3'5'H/CYP75A 11 0.39% CHS 11 0.39% DFR 11 0.39% ANS/LDOX 11 0.39% MPO 10 0.36% F5H/CYP84A 10 0.36% COMT 9 0.32% CYP51G1 9 0.32% ROT3/CYP90C1 8 0.29% 8HGO 7 0.25% ISY 7 0.25% CCoAOMT 7 0.25% GGPPS 7 0.25% FPPS 7 0.25% CPR 6 0.21% SQE 6 0.21% DXS 6 0.21% AACT 6 0.21% CYP80B1 5 0.18% 16OMT 5 0.18% HPPR 5 0.18% DET2 5 0.18% SQS/FDFT1 5 0.18% HMGR 5 0.18% CYP719 4 0.14% CHI 4 0.14% SMO1/SMO2 4 0.14% MVK 4 0.14% MVD 4 0.14% ODC 3 0.11% TYDC_DDC 3 0.11% MCT/IspD 3 0.11% XMT_MXMT_DXMT 2 0.07% TDC 2 0.07% FLS 2 0.07% DWF7 2 0.07% DWF1 2 0.07% PMK 2 0.07% IDI 2 0.07% MDS/IspF 2 0.07% HDS/IspG 2 0.07% CYP80F1 1 0.04% 6OMT_4OMT_SOMT 1 0.04% ADC 1 0.04% CPI1 1 0.04% HYD1 1 0.04% DWF5 1 0.04% FK 1 0.04% DXR 1 0.04% CMK/IspE 1 0.04% HDR/IspH 1 0.04% HMGS 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 375 19 UGT (139) View species results
Alkaloid pathway 263 22 7DLGT (57) View species results
Phenylpropanoid pathway 236 11 POD (94) View species results
Flavonoid pathway 181 12 UFGT (114) View species results
Rosmarinic acid pathway 115 7 C4H (37) View species results
Steroid pathway 76 14 SMT1/SMT2/SMT3 (31) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 971 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
tapiscia_sinensis_evm.model.scaf_9.169 Terpenoid UGT low borderline UGT__00045__sp_K4GKX2_73C10_BARVU
tapiscia_sinensis_evm.model.scaf_9.170 Terpenoid UGT low borderline UGT__00078__sp_Q8W491_U73B3_ARATH
tapiscia_sinensis_evm.model.scaf_9.171 Terpenoid UGT low borderline UGT__00112__sp_Q9ZQG4_U73B5_ARATH
tapiscia_sinensis_evm.model.scaf_96.57 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
tapiscia_sinensis_evm.model.scaf_96.59 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR