Tapiscia sinensis (tapiscia_sinensis)
Imported from atlas release summary for Tapiscia sinensis.
1386
Candidate Protein Records
1246
Pathway-Level Records
2805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2805
Family-Level Calls
BAHD
6.06%
C4H
5.63%
C3'H/CYP98A
5.45%
UGT
5.35%
7DLGT
4.78%
UFGT
4.56%
4CL
4.49%
IFS
3.57%
Other Families
60.11%
More Families (97)
POD
100
3.57%
CYP76
97
3.46%
T3O
89
3.17%
F3H
76
2.71%
DWF4/CYP90B1
67
2.39%
NMT
58
2.07%
F3'H/CYP75B
48
1.71%
STR
46
1.64%
CAD
45
1.6%
SMT1/SMT2/SMT3
43
1.53%
H6H
40
1.43%
CODM/T6ODM
40
1.43%
TRI/TRII
37
1.32%
LAC
33
1.18%
CYP71
32
1.14%
TAT
31
1.11%
GS
30
1.07%
BR6OX2/CYP85A2
30
1.07%
CYP90D1
28
1.0%
IO
27
0.96%
IFR
27
0.96%
CSE
27
0.96%
HCT
26
0.93%
CAS
26
0.93%
T16H
23
0.82%
ANR
22
0.78%
PYKS
21
0.75%
PMT
21
0.75%
FNS
20
0.71%
NCS
18
0.64%
LAMT
18
0.64%
CCR
17
0.61%
TPS
17
0.61%
G8O/G8H
16
0.57%
RAS
16
0.57%
BR6OX1/CYP85A1
16
0.57%
COR
15
0.53%
GES
15
0.53%
PAL
15
0.53%
CPD/CYP90A1
15
0.53%
7DLH
13
0.46%
BBE
13
0.46%
CNMT
12
0.43%
SGD
12
0.43%
SLS
11
0.39%
F3'5'H/CYP75A
11
0.39%
CHS
11
0.39%
DFR
11
0.39%
ANS/LDOX
11
0.39%
MPO
10
0.36%
F5H/CYP84A
10
0.36%
COMT
9
0.32%
CYP51G1
9
0.32%
ROT3/CYP90C1
8
0.29%
8HGO
7
0.25%
ISY
7
0.25%
CCoAOMT
7
0.25%
GGPPS
7
0.25%
FPPS
7
0.25%
CPR
6
0.21%
SQE
6
0.21%
DXS
6
0.21%
AACT
6
0.21%
CYP80B1
5
0.18%
16OMT
5
0.18%
HPPR
5
0.18%
DET2
5
0.18%
SQS/FDFT1
5
0.18%
HMGR
5
0.18%
CYP719
4
0.14%
CHI
4
0.14%
SMO1/SMO2
4
0.14%
MVK
4
0.14%
MVD
4
0.14%
ODC
3
0.11%
TYDC_DDC
3
0.11%
MCT/IspD
3
0.11%
XMT_MXMT_DXMT
2
0.07%
TDC
2
0.07%
FLS
2
0.07%
DWF7
2
0.07%
DWF1
2
0.07%
PMK
2
0.07%
IDI
2
0.07%
MDS/IspF
2
0.07%
HDS/IspG
2
0.07%
CYP80F1
1
0.04%
6OMT_4OMT_SOMT
1
0.04%
ADC
1
0.04%
CPI1
1
0.04%
HYD1
1
0.04%
DWF5
1
0.04%
FK
1
0.04%
DXR
1
0.04%
CMK/IspE
1
0.04%
HDR/IspH
1
0.04%
HMGS
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 375 | 19 | UGT (139) | View species results |
| Alkaloid pathway | 263 | 22 | 7DLGT (57) | View species results |
| Phenylpropanoid pathway | 236 | 11 | POD (94) | View species results |
| Flavonoid pathway | 181 | 12 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 115 | 7 | C4H (37) | View species results |
| Steroid pathway | 76 | 14 | SMT1/SMT2/SMT3 (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 971 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 212 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| tapiscia_sinensis_evm.model.scaf_494.65 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| tapiscia_sinensis_evm.model.scaf_549.92 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| tapiscia_sinensis_evm.model.scaf_58.632 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| tapiscia_sinensis_evm.model.scaf_58.668.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| tapiscia_sinensis_evm.model.scaf_6.400.1 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| tapiscia_sinensis_evm.model.scaf_62.6 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| tapiscia_sinensis_evm.model.scaf_63.26 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| tapiscia_sinensis_evm.model.scaf_70.635 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| tapiscia_sinensis_evm.model.scaf_87.2 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| tapiscia_sinensis_evm.model.scaf_1.353 | Steroid | SQE | medium | pass |
| tapiscia_sinensis_evm.model.scaf_16.42 | Steroid | SQE | medium | pass |
| tapiscia_sinensis_evm.model.scaf_421.126 | Steroid | SQE | medium | pass |
| tapiscia_sinensis_evm.model.scaf_421.129 | Steroid | SQE | medium | pass |
| tapiscia_sinensis_evm.model.scaf_421.130 | Steroid | SQE | medium | pass |
| tapiscia_sinensis_evm.model.scaf_43.722 | Steroid | SQE | medium | pass |
| tapiscia_sinensis_evm.model.scaf_23.386 | Steroid | SQS/FDFT1 | medium | pass |
| tapiscia_sinensis_evm.model.scaf_23.516.1 | Steroid | SQS/FDFT1 | medium | pass |
| tapiscia_sinensis_evm.model.scaf_476.376 | Steroid | SQS/FDFT1 | low | borderline |
| tapiscia_sinensis_evm.model.scaf_54.232.3 | Steroid | SQS/FDFT1 | high | pass |
| tapiscia_sinensis_evm.model.scaf_78.136 | Steroid | SQS/FDFT1 | low | borderline |